RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-205	ENST00000601194	ANXA4	P09525	319 aa	Predicted RBP	13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	CPM	P14384	443 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	PRPH2	P23942	346 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	CYB561	P49447	251 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	HLCS	P50747	726 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	HK2	P52789	917 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	ERVK-8	P63133	956 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	RNF4	P78317	190 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	CASP8	Q14790	479 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	UGT3A2	Q3SY77	523 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	ZNF766	Q5HY98	468 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	SH2D4B	Q5SQS7	431 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	SPINK14	Q6IE38	97 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	ATCAY	Q86WG3	371 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	ZNF227	Q86WZ6	799 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	NUDCD3	Q8IVD9	361 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	C9orf40	Q8IXQ3	194 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	OR2T11	Q8NH01	316 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	FAM76A	Q8TAV0	307 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	GRHL3	Q8TE85	626 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	DOK4	Q8TEW6	326 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	C16orf78	Q8WTQ4	265 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	SCMH1	Q96GD3	660 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	METTL2A	Q96IZ6	378 aa	Known RBP	13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	TAAR6	Q96RI8	345 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	CNPPD1	Q9BV87	410 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	HES7	Q9BYE0	225 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	STMN4	Q9H169	189 aa	Predicted RBP	13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	LIN28A	Q9H9Z2	209 aa	Known RBP	13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	LRFN1	Q9P244	771 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	ERVK-19	Q9WJR5	959 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	YARS2	Q9Y2Z4	477 aa	Known RBP	13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	FIS1	Q9Y3D6	152 aa		13.26	□□□□□ -0.29
PSMC4-205	ENST00000601194	GOLGA6L10	A6NI86	522 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	TCP11X1	B4DZS4	312 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	SLC28A1	O00337	649 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	VPS4B	O75351	444 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	CHEK2	O96017	543 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	CLPS	P04118	112 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	ATP1B1	P05026	303 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	NEFH	P12036	1026 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	DRD2	P14416	443 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	CD46	P15529	392 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	POR	P16435	677 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	GSTM5	P46439	218 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	ALDH9A1	P49189	494 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	SSR4	P51571	173 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	SLC37A1	P57057	533 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	KCNC4	Q03721	635 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	ZNF763	Q0D2J5	394 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	ZNF267	Q14586	743 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	KIAA0040	Q15053	153 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	FAM180A	Q6UWF9	173 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194		Q6ZSR9	355 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	HOMEZ	Q8IX15	550 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	GALNT12	Q8IXK2	581 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	CLYBL	Q8N0X4	340 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	HORMAD2	Q8N7B1	307 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	OR5L2	Q8NGL0	311 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	NUBPL	Q8TB37	319 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.25	□□□□□ -0.29	7e-13	■■■■■ 30.1
PSMC4-205	ENST00000601194	TWIST2	Q8WVJ9	160 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	KLHL29	Q96CT2	875 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	CNRIP1	Q96F85	164 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	ZNF681	Q96N22	645 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	RASL10B	Q96S79	203 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	LRTM1	Q9HBL6	345 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	TMBIM4	Q9HC24	238 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	KCNK9	Q9NPC2	374 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	KLHL1	Q9NR64	748 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	AGPAT4	Q9NRZ5	378 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	PSME2	Q9UL46	239 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	VPS4A	Q9UN37	437 aa		13.25	□□□□□ -0.29
PSMC4-205	ENST00000601194	LRRK2	Q5S007	2527 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	WDR91	A4D1P6	747 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	WWP2	O00308	870 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	PIP5K1B	O14986	540 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	RGS14	O43566	566 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	ERAL1	O75616	437 aa	Known RBP	13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	SLC25A12	O75746	678 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	SERPINE1	P05121	402 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	CT62	P0C5K7	136 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	LINC00032	P0C843	101 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	CSNK2A2	P19784	350 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	FEN1	P39748	380 aa	Known RBP	13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	UQCRFS1	P47985	274 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	DUSP2	Q05923	314 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	FUT7	Q11130	342 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	HEPACAM	Q14CZ8	416 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	CHI3L2	Q15782	390 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	NOXRED1	Q6NXP6	359 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	FAM180B	Q6P0A1	224 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	RNF111	Q6ZNA4	994 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	TMEM156	Q8N614	296 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	BCORP1	Q8N888	145 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	PPP1R14C	Q8TAE6	165 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	AGR3	Q8TD06	166 aa		13.24	□□□□□ -0.29
PSMC4-205	ENST00000601194	FAR1	Q8WVX9	515 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms