RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 LOC102723996A0A087X1L8 192 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 GLOD5A6NK44 160 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 A6NL46 340 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 PEX12O00623 359 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 LDB3O75112 727 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 ITGB2P05107 769 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 NR2F6P10588 404 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 COX6A1P12074 109 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 CPN2P22792 545 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 PPP2R1BP30154 601 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 TLX1P31314 330 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-207ENST00000597136 BUD31P41223 144 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-207ENST00000597136 TNFRSF17Q02223 184 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 ID2Q02363 134 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 PDE7AQ13946 482 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 RCAN2Q14206 197 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 PCOLCEQ15113 449 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 DCAF10Q5QP82 559 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 GK5Q6ZS86 529 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 R3HCC1LQ7Z5L2 792 aaKnown RBP14.04□□□□□ -0.16
TRIM28-207ENST00000597136 CPEB2Q7Z5Q1 589 aaKnown RBP14.04□□□□□ -0.16
TRIM28-207ENST00000597136 OR4N5Q8IXE1 308 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 METTL21AQ8WXB1 218 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 MTERF3Q96E29 417 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 IP6K3Q96PC2 410 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 WDR77Q9BQA1 342 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-207ENST00000597136 SLC52A3Q9NQ40 469 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 PRTFDC1Q9NRG1 225 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 SPACA6W5XKT8 324 aa14.04□□□□□ -0.16
TRIM28-207ENST00000597136 NINQ8N4C6 2090 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 IGKV3D-11A0A0A0MRZ8 115 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 IGHV1-45A0A0A0MS14 117 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 C1orf226A1L170 272 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 A8MUA0 341 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 PGRMC2O15173 223 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 SEC24DO94855 1032 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 CELA2AP08217 269 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 COX7A2P14406 83 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 RPL3P39023 403 aaKnown RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 ALDH9A1P49189 494 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 DGKQP52824 942 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 RHDQ02161 417 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 SRSF11Q05519 484 aaKnown RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 LY6DQ14210 128 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 KRT72Q14CN4 511 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 PGS1Q32NB8 556 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 FAM174BQ3ZCQ3 159 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 SFT2D3Q587I9 215 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 SPANXN4Q5MJ08 99 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 CPTPQ5TA50 214 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 ANKRD26P1Q6NSI1 321 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 QSOX2Q6ZRP7 698 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 CAMKMTQ7Z624 323 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 TICAM1Q8IUC6 712 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 APLFQ8IW19 511 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 SCUBE1Q8IWY4 988 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 TMEM102Q8N9M5 508 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 NACC2Q96BF6 587 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 ANKRD9Q96BM1 317 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 COQ8BQ96D53 544 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 ZNF764Q96H86 408 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 BBC3Q96PG8 261 aaPredicted RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 PRPF18Q99633 342 aaKnown RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 RPF2Q9H7B2 306 aaKnown RBP14.03□□□□□ -0.16
TRIM28-207ENST00000597136 ZNF160Q9HCG1 818 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 MIEF1Q9NQG6 463 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 PRDM9Q9NQV7 894 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 ARL8BQ9NVJ2 186 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 TAS2R7Q9NYW3 318 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 EHD3Q9NZN3 535 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 CES1P1Q9UKY3 287 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 SVILO95425 2214 aa14.03□□□□□ -0.16
TRIM28-207ENST00000597136 LOC100653049A0A140TA62 436 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 K7EM74 188 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 NR5A2O00482 541 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 TBX19O60806 448 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 CTNSO60931 367 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 KRT34O76011 436 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 IL6P05231 212 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 SNRPB2P08579 225 aaKnown RBP14.02□□□□□ -0.16
TRIM28-207ENST00000597136 LAMP1P11279 417 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 COX4I1P13073 169 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 POLE2P56282 527 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 KCNK10P57789 538 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 PHC1P78364 1004 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 SLC13A2Q13183 592 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 RAPSNQ13702 412 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 CYLC2Q14093 348 aaPredicted RBP14.02□□□□□ -0.16
TRIM28-207ENST00000597136 PRSS53Q2L4Q9 553 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 DPY19L1Q2PZI1 675 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 ZNF385BQ569K4 471 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 SLC48A1Q6P1K1 146 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 NDUFAF7Q7L592 441 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 SNX32Q86XE0 403 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 ZNF595Q8IYB9 648 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 POU5F2Q8N7G0 328 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 OR8J2Q8NGG1 315 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 ADAMTS18Q8TE60 1221 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 TSPEARQ8WU66 669 aa14.02□□□□□ -0.16
TRIM28-207ENST00000597136 VPS33AQ96AX1 596 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms