RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 HMOX2P30519 316 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 CCT5P48643 541 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 XKP51811 444 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 GALNT1Q10472 559 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-203ENST00000593582 TBL3Q12788 808 aaKnown RBP14.13□□□□□ -0.15
TRIM28-203ENST00000593582 C3AR1Q16581 482 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 ZNF750Q32MQ0 723 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 C6orf163Q5TEZ5 329 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 Q6ZPB1 254 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-203ENST00000593582 TDRPQ86YL5 185 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 C16orf52Q8NHV5 167 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 DOK4Q8TEW6 326 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 UCN3Q969E3 161 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 CCDC120Q96HB5 630 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 GAL3ST4Q96RP7 486 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 HBEGFQ99075 208 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 DEPPQ9NTK1 212 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 TINAGQ9UJW2 476 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 NAV2Q8IVL1 2488 aa14.13□□□□□ -0.15
TRIM28-203ENST00000593582 CRYBG3Q68DQ2 2970 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 C1orf226A1L170 272 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 SMIM23A6NLE4 172 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 OR6C76A6NM76 312 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 ACOT7O00154 380 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 ZNF354AO60765 605 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 P04436 131 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 MYL2P10916 166 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 PTGER1P34995 402 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 DEKP35659 375 aaKnown RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 PKNOX1P55347 436 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 SLC37A1P57057 533 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 HSF1Q00613 529 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 PLGLB1Q02325 96 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 CSTF3Q12996 717 aaKnown RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 CCDC153Q494R4 210 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 TCHHL1Q5QJ38 904 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 RPTNQ6XPR3 784 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 RGS9BPQ6ZS82 235 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 GK5Q6ZS86 529 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 GALNT12Q8IXK2 581 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 SLC15A4Q8N697 577 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 C1orf52Q8N6N3 182 aaKnown RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 CCNYL1Q8N7R7 359 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 GBP7Q8N8V2 638 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 OR2M7Q8NG81 312 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 FAM173AQ9BQD7 235 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 WWTR1Q9GZV5 400 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 CXorf21Q9HAI6 301 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 SACM1LQ9NTJ5 587 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 PSME2Q9UL46 239 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 GRID1Q9ULK0 1009 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 UNC79Q9P2D8 2635 aa14.12□□□□□ -0.15
TRIM28-203ENST00000593582 DIDO1Q9BTC0 2240 aaKnown RBP14.12□□□□□ -0.15
TRIM28-203ENST00000593582 GOLGA6L10A6NI86 522 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 FOXO6A8MYZ6 492 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 G3V2L1 256 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 G3V3Y1 287 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 PRRG2O14669 202 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 CDC40O60508 579 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 CDH16O75309 829 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 ENO1P06733 434 aaKnown RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 CPMP14384 443 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 PORP16435 677 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 CNR1P21554 472 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 CRHR1P34998 444 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 NAA20P61599 178 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 PPIAP62937 165 aaKnown RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 TRA2BP62995 288 aaKnown RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 EBPQ15125 230 aaKnown RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 CMPK2Q5EBM0 449 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 SLC48A1Q6P1K1 146 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 ZYG11AQ6WRX3 759 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 FAM47EQ6ZV65 393 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 SH2D5Q6ZV89 423 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 MRGPRGQ86SM5 289 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 SLC22A16Q86VW1 577 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 DND1Q8IYX4 353 aaKnown RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 TAGAPQ8N103 731 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 EPS8L3Q8TE67 593 aaKnown RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 CHTF18Q8WVB6 975 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 SPACA9Q96E40 222 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-203ENST00000593582 FAIM2Q9BWQ8 316 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 EMCNQ9ULC0 261 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 PCDHA9Q9Y5H5 950 aa14.11□□□□□ -0.15
TRIM28-203ENST00000593582 A0A0G2JMM0 328 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 A0A1B0GTH9 108 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 C2orf92A0A1B0GVN3 265 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 A0A1W2PPB8 328 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 A0A1W2PRS3 328 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 A0A1W2PS29 197 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 PINLYPA6NC86 204 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 KIR3DP1A8MWS1 328 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 COPEO14579 308 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 ESRRBO95718 433 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 PROCP04070 461 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 CCL3P10147 92 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 KRT4P19013 534 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 NT5EP21589 574 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 SERPINB3P29508 390 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms