RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 ZCCHC7Q8N3Z6 543 aaKnown RBP13.28□□□□□ -0.28
SDF2-202ENST00000585428 GOT1L1Q8NHS2 421 aaPredicted RBP13.28□□□□□ -0.28
SDF2-202ENST00000585428 STAG3L4Q8TBR4 150 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 DOK4Q8TEW6 326 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 RNASE6Q93091 150 aaKnown RBP13.28□□□□□ -0.28
SDF2-202ENST00000585428 CPNE1Q99829 537 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.28□□□□□ -0.28
SDF2-202ENST00000585428 CBLCQ9ULV8 474 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 RNF112Q9ULX5 631 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 PLEKHA6Q9Y2H5 1048 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 ASB4Q9Y574 426 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 OR6C76A6NM76 312 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 PLPP1O14494 284 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 DVL2O14641 736 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 PCNAP12004 261 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 BMP5P22003 454 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 TLX1P31314 330 aaPredicted RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 GMPRP36959 345 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 PIK3CBP42338 1070 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 ASCL1P50553 236 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 PLIN5Q00G26 463 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 DLG1Q12959 904 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 ZNF267Q14586 743 aaPredicted RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 EBPQ15125 230 aaKnown RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 ACSF3Q4G176 576 aaPredicted RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 FNDC7Q5VTL7 733 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 TMEM198Q66K66 360 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 VASNQ6EMK4 673 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 MRM1Q6IN84 353 aaKnown RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 SLC29A4Q7RTT9 530 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 RNF175Q8N4F7 328 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 ZNF441Q8N8Z8 693 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 FAM13CQ8NE31 585 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 HUS1BQ8NHY5 278 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 PYROXD1Q8WU10 500 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 RIT1Q92963 219 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 TP53INP1Q96A56 240 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 JSRP1Q96MG2 331 aaPredicted RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 ATOH8Q96SQ7 321 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 RBBP8Q99708 897 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 DOHHQ9BU89 302 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 ZNF717Q9BY31 904 aaPredicted RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 WWTR1Q9GZV5 400 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 UBQLN3Q9H347 655 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 PHF11Q9UIL8 331 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 FOXD3Q9UJU5 478 aaPredicted RBP13.27□□□□□ -0.29
SDF2-202ENST00000585428 SNX24Q9Y343 169 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 VPS13CQ709C8 3753 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 EML6Q6ZMW3 1958 aa13.27□□□□□ -0.29
SDF2-202ENST00000585428 A0A1W2PR48 441 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 FAM159BA6NKW6 160 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 EFCAB8A8MWE9 144 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 K7EPI3 171 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 PRKRAO75569 313 aaKnown RBP13.26□□□□□ -0.29
SDF2-202ENST00000585428 SNX4O95219 450 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 ACSL3O95573 720 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 IL2RAP01589 272 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 HPNP05981 417 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 EPXP11678 715 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 MTHFD2P13995 350 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 PTX3P26022 381 aaPredicted RBP13.26□□□□□ -0.29
SDF2-202ENST00000585428 ZNF136P52737 540 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 WNT3P56703 355 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 RAB10P61026 200 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 HERVK_113P63132 956 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 ERVK-8P63133 956 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 TNFRSF17Q02223 184 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 NHSL2Q5HYW2 709 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 TBCELQ5QJ74 424 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 NSUN5P2Q63ZY6 315 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 GRHL2Q6ISB3 625 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 CAPN12Q6ZSI9 719 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 C3orf62Q6ZUJ4 267 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 LACC1Q8IV20 430 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 MMP21Q8N119 569 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 LIX1Q8N485 282 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 UBTD2Q8WUN7 234 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 UCN3Q969E3 161 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 LRRC46Q96FV0 321 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 GNRHR2Q96P88 292 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 PELOQ9BRX2 385 aaKnown RBP13.26□□□□□ -0.29
SDF2-202ENST00000585428 ERVK-6Q9BXR3 956 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 ANGPTL4Q9BY76 406 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 PRDM14Q9GZV8 571 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 EPB41L4BQ9H329 900 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 ALG9Q9H6U8 611 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 DDX31Q9H8H2 851 aaKnown RBP13.26□□□□□ -0.29
SDF2-202ENST00000585428 DMRT3Q9NQL9 472 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 PSD3Q9NYI0 1048 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 JKAMPQ9P055 326 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 ERVK-19Q9WJR5 959 aa13.26□□□□□ -0.29
SDF2-202ENST00000585428 C2orf92A0A1B0GVN3 265 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 TCRBV9S1A1TA0A576 114 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 ZSCAN12O43309 604 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 TMPRSS11DO60235 418 aa13.25□□□□□ -0.29
SDF2-202ENST00000585428 EEDO75530 441 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms