RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 PIK3CBP42338 1070 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 DLG1Q12959 904 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 DDX39BQ13838 428 aaKnown RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 ZNF267Q14586 743 aaPredicted RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 HSPB2Q16082 182 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 GRHL2Q6ISB3 625 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 SEM1Q6ZVN7 128 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 CTAGE3PQ8IX95 158 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 ZCCHC7Q8N3Z6 543 aaKnown RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 RNF175Q8N4F7 328 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 FAM13CQ8NE31 585 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 OR10G3Q8NGC4 313 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 HUS1BQ8NHY5 278 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 NEIL3Q8TAT5 605 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 DOK4Q8TEW6 326 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 UBTD2Q8WUN7 234 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 NINJ1Q92982 152 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 ART5Q96L15 291 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 JSRP1Q96MG2 331 aaPredicted RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 GAL3ST4Q96RP7 486 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 ATOH8Q96SQ7 321 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 CENPKQ9BS16 269 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 POLDIP3Q9BY77 421 aaKnown RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 LIME1Q9H400 295 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 NMRAL1Q9HBL8 299 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 IGSF5Q9NSI5 407 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 CCM2LQ9NUG4 571 aaPredicted RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 ZNF358Q9NW07 568 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 QPCTLQ9NXS2 382 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 OPTCQ9UBM4 332 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 B4GALT7Q9UBV7 327 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 PHF11Q9UIL8 331 aa12.34□□□□□ -0.43
AC055811.3-201ENST00000584952 EML6Q6ZMW3 1958 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 FAM221AA4D161 298 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 WASHC1A8K0Z3 465 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 AHRRA9YTQ3 701 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 SUPT3HB4E1H0 165 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 UBXN8O00124 270 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 PLPP1O14494 284 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 PROM1O43490 865 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 OR10H2O60403 315 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 KERAO60938 352 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 SUPT3HO75486 399 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 FAM155BO75949 473 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 GPR75O95800 540 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 SLC35E2BP0CK96 405 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 ECHS1P30084 290 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 PEX19P40855 299 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 ARFIP1P53367 373 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 HNRNPH2P55795 449 aaKnown RBP12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 SLC37A1P57057 533 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 HERVK_113P63132 956 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 ERVK-8P63133 956 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 SPRED3Q2MJR0 410 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 RNF111Q6ZNA4 994 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 SLC29A4Q7RTT9 530 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 LIX1Q8N485 282 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 CHDHQ8NE62 594 aaPredicted RBP12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 IFT81Q8WYA0 676 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 RIT1Q92963 219 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 POM121Q96HA1 1249 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 MTERF1Q99551 399 aaKnown RBP12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 PELOQ9BRX2 385 aaKnown RBP12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 DOHHQ9BU89 302 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 ERVK-6Q9BXR3 956 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 WWTR1Q9GZV5 400 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 SLC6A15Q9H2J7 730 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 CLEC4MQ9H2X3 399 aaPredicted RBP12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 DMRT3Q9NQL9 472 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 RASSF1Q9NS23 344 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 CRIM1Q9NZV1 1036 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 ST6GALNAC2Q9UJ37 374 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 CNOT11Q9UKZ1 510 aaKnown RBP12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 TSC22D4Q9Y3Q8 395 aa12.33□□□□□ -0.44
AC055811.3-201ENST00000584952 A0A1W2PR48 441 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 ANKRD33BA6NCL7 494 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 GLOD5A6NK44 160 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 ZNF500O60304 480 aaPredicted RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 TRIM3O75382 744 aaPredicted RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 LRATO95237 230 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 CLPSP04118 112 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 LTA4HP09960 611 aaKnown RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 PTX3P26022 381 aaPredicted RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 CRABP2P29373 138 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 UQCRC1P31930 480 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 BUD31P41223 144 aaPredicted RBP12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 TRPC1P48995 793 aa12.32□□□□□ -0.44
AC055811.3-201ENST00000584952 DUSP8Q13202 625 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms