RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	OR4F21	O95013	312 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ESRRB	O95718	433 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	PDYN	P01213	254 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SMS	P52788	366 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC37A1	P57057	533 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	GALNT1	Q10472	559 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	FUT7	Q11130	342 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HYAL4	Q2M3T9	481 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF791	Q3KP31	576 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SPIN4	Q56A73	249 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	RNFT1	Q5M7Z0	435 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	C6orf163	Q5TEZ5	329 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC48A1	Q6P1K1	146 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ARHGAP11A	Q6P4F7	1023 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SH2D5	Q6ZV89	423 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC22A16	Q86VW1	577 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	GALNT12	Q8IXK2	581 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	C9orf40	Q8IXQ3	194 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TAGAP	Q8N103	731 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF321P	Q8N8H1	164 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	C17orf47	Q8NEP4	570 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OR2M7	Q8NG81	312 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OR7G1	Q8NGA0	311 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	METTL6	Q8TCB7	284 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	PHF10	Q8WUB8	498 aa	Known RBP	11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	CHTF18	Q8WVB6	975 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	PPWD1	Q96BP3	646 aa	Known RBP	11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	CXorf21	Q9HAI6	301 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SACM1L	Q9NTJ5	587 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TEX10	Q9NXF1	929 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	CNIH4	Q9P003	139 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TBK1	Q9UHD2	729 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF225	Q9UK10	706 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	CFL2	Q9Y281	166 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	PCDHA9	Q9Y5H5	950 aa		11.65	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	MYO7B	Q6PIF6	2116 aa		11.65	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		A0A1B0GTL3	188 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MYOCOS	A0A1B0GUC4	107 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		A1L4Q6	167 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GLOD5	A6NK44	160 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		E9PLN8	166 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PPP6C	O00743	305 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PGRMC2	O15173	223 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GBA	P04062	536 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		P04436	131 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ATP1B1	P05026	303 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FBXO45	P0C2W1	286 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MYL2	P10916	166 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ESRRA	P11474	423 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DRD2	P14416	443 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	POR	P16435	677 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ABO	P16442	354 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	KRT15	P19012	456 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CSNK2A2	P19784	350 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SERPINB3	P29508	390 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HMOX2	P30519	316 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CRHR1	P34998	444 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ST13	P50502	369 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	XK	P51811	444 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DNAJB13	P59910	316 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ERVK-8	P63133	956 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF267	Q14586	743 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	EBP	Q15125	230 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SGO1	Q5FBB7	561 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TBCEL	Q5QJ74	424 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SLC22A10	Q63ZE4	541 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GALNT18	Q6P9A2	607 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZYG11A	Q6WRX3	759 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CHERP	Q8IWX8	916 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RIBC1	Q8N443	379 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CDYL2	Q8N8U2	506 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PAQR8	Q8TEZ7	354 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ERP27	Q96DN0	273 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SPACA9	Q96E40	222 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CCDC120	Q96HB5	630 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	METTL2A	Q96IZ6	378 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SECISBP2	Q96T21	854 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	VKORC1	Q9BQB6	163 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CNPPD1	Q9BV87	410 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	WWTR1	Q9GZV5	400 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZDHHC11	Q9H8X9	412 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	IL1RL2	Q9HB29	575 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SH2D2A	Q9NP31	389 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FARSB	Q9NSD9	589 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SIRT5	Q9NXA8	310 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MCM8	Q9UJA3	840 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MID2	Q9UJV3	735 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CES1P1	Q9UKY3	287 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ERVK-19	Q9WJR5	959 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ENTPD4	Q9Y227	616 aa		11.64	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GTF3C1	Q12789	2109 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	C2orf92	A0A1B0GVN3	265 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ANKRD33B	A6NCL7	494 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	OR14I1	A6ND48	311 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GOLGA8R	I6L899	631 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PRKRA	O75569	313 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GLS	O94925	669 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PROC	P04070	461 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms