RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-218	ENST00000569569	IMPG1	Q17R60	797 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	SPDYA	Q5MJ70	313 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	SLC48A1	Q6P1K1	146 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	GALNT18	Q6P9A2	607 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	EXOC3L1	Q86VI1	746 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ST6GALNAC3	Q8NDV1	305 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	TMEM125	Q96AQ2	219 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	C11orf24	Q96F05	449 aa	Predicted RBP	12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	FBXL20	Q96IG2	436 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CNPPD1	Q9BV87	410 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CENPH	Q9H3R5	247 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	LIN28A	Q9H9Z2	209 aa	Known RBP	12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	EML4	Q9HC35	981 aa	Known RBP	12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	SSU72	Q9NP77	194 aa	Known RBP	12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	TNFRSF12A	Q9NP84	129 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	KLHL1	Q9NR64	748 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	OLAH	Q9NV23	265 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ERVK-19	Q9WJR5	959 aa		12.83	□□□□□ -0.36
HERPUD1-218	ENST00000569569	MYO7B	Q6PIF6	2116 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	GNG14	A0A1W2PPG7	69 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ANKUB1	A6NFN9	424 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	GOLGA6L10	A6NI86	522 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	WWP2	O00308	870 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	AZIN1	O14977	448 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ERAL1	O75616	437 aa	Known RBP	12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	SLC25A12	O75746	678 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	OR2J2	O76002	312 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	BPGM	P07738	259 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	FGF4	P08620	206 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CPM	P14384	443 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	DRD2	P14416	443 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	TIA1	P31483	386 aa	Known RBP eCLIP	12.82	□□□□□ -0.36	9e-7	■■■□□ 15.9
HERPUD1-218	ENST00000569569	SERPINB5	P36952	375 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ETV4	P43268	484 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	GSTM5	P46439	218 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	MRPL49	Q13405	166 aa	Known RBP	12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	HEPACAM	Q14CZ8	416 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	MAPKAPK3	Q16644	382 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	TNFAIP8L3	Q5GJ75	292 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ZNF324B	Q6AW86	544 aa	Predicted RBP	12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CLEC6A	Q6EIG7	209 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	LRIG3	Q6UXM1	1119 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	GALNTL5	Q7Z4T8	443 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ZNF227	Q86WZ6	799 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	GPALPP1	Q8IXQ4	340 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	FAM98A	Q8NCA5	519 aa	Known RBP	12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	NUBPL	Q8TB37	319 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ASB15	Q8WXK1	588 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	NR4A3	Q92570	626 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	METTL2A	Q96IZ6	378 aa	Known RBP	12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	SLX1A	Q9BQ83	275 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	HES7	Q9BYE0	225 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CXorf21	Q9HAI6	301 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	DLGAP4	Q9Y2H0	992 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ACTL7B	Q9Y614	415 aa		12.82	□□□□□ -0.36
HERPUD1-218	ENST00000569569	DNAJC13	O75165	2243 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569		A0A1W2PS29	197 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569		A8MVJ9	347 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	HRK	O00198	91 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	SLC28A1	O00337	649 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	NME2P1	O60361	137 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	RSL1D1	O76021	490 aa	Known RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ZIC2	O95409	532 aa	Predicted RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CHEK2	O96017	543 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ANXA4	P09525	319 aa	Predicted RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	FREM3	P0C091	2139 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	MYZAP	P0CAP1	466 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CSNK2A2	P19784	350 aa	Predicted RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	NME2	P22392	152 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ALDH9A1	P49189	494 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	MPEG1	Q2M385	716 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ARL13A	Q5H913	290 aa	Predicted RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	FHL5	Q5TD97	284 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	C6orf163	Q5TEZ5	329 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	RNF111	Q6ZNA4	994 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	RNF165	Q6ZSG1	346 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	SLC29A4	Q7RTT9	530 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	NUDCD3	Q8IVD9	361 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	GALNT12	Q8IXK2	581 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	C9orf40	Q8IXQ3	194 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CLYBL	Q8N0X4	340 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	MMP21	Q8N119	569 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	CYP4Z2P	Q8N1L4	340 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	FAM76A	Q8TAV0	307 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	PRR7	Q8TB68	274 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	DOK4	Q8TEW6	326 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	C16orf78	Q8WTQ4	265 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	KLHL29	Q96CT2	875 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	PGM2	Q96G03	612 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	RASL10B	Q96S79	203 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	EBPL	Q9BY08	206 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	RYDEN	Q9NUL5	291 aa	Known RBP	12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	HPF1	Q9NWY4	346 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	HEY2	Q9UBP5	337 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	UTS2R	Q9UKP6	389 aa		12.81	□□□□□ -0.36
HERPUD1-218	ENST00000569569	ERVK-11	Q9UQG0	969 aa		12.81	□□□□□ -0.36

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