RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SYNJ2BP-COX16A0A087WUM0 186 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 MAGEB16A2A368 324 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 OOEPA6NGQ2 149 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 CCSO14618 274 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 SLC30A4O14863 429 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 MCF2LO15068 1137 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 CHUKO15111 745 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 CTAGE5O15320 804 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 KIAA0513O60268 411 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 CSO75390 466 aaKnown RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 ANXA9O76027 345 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 SNX4O95219 450 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 OR6A2O95222 327 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 APBB3O95704 486 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 LY6G6DO95868 133 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 C8orf89P0DMQ9 161 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 SFTPCP11686 197 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 GZMAP12544 262 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 P4HA1P13674 534 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 HSD17B1P14061 328 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 TMOD1P28289 359 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 PBLDP30039 288 aaPredicted RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 PPP2R1BP30154 601 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 HMGCS2P54868 508 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 LYZP61626 148 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 RBP5P82980 135 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 LRRC74AQ0VAA2 488 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 CCL14Q16627 93 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 LINC00242Q5T6M2 205 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 LRRC38Q5VT99 294 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 SNRNP48Q6IEG0 339 aaKnown RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 RAB12Q6IQ22 244 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 RAPH1Q70E73 1250 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 AQP12AQ8IXF9 295 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 NUP93Q8N1F7 819 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 ATAD1Q8NBU5 361 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 SAP25Q8TEE9 199 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 ZNF606Q8WXB4 792 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 MR1Q95460 341 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 TEKT1Q969V4 418 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 MRPL24Q96A35 216 aaKnown RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 ULK4Q96C45 1275 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 ZBED6CLQ96FA7 236 aaPredicted RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 CDKN2AIPNLQ96HQ2 116 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 ZNF414Q96IQ9 312 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 RASL10BQ96S79 203 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 PARK7Q99497 189 aaKnown RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 ABCB10Q9NRK6 738 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 MRPL17Q9NRX2 175 aaKnown RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 HPF1Q9NWY4 346 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 ZMAT5Q9UDW3 170 aaKnown RBP2.52□□□□□ -2.01
SPG11-206ENST00000558093 DUSP12Q9UNI6 340 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 SLC6A5Q9Y345 797 aa2.52□□□□□ -2.01
SPG11-206ENST00000558093 KIAA1217Q5T5P2 1943 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 A0A1W2PNU3 283 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 CCDC69A6NI79 296 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 PSMA7O14818 248 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 SYT7O43581 403 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 SRPX2O60687 465 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 ATP9AO75110 1047 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 STAM2O75886 525 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 FCGR3AP08637 254 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 HSPA5P11021 654 aaKnown RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 ODC1P11926 461 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 NEFHP12036 1026 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 CPA3P15088 417 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 RPS2P15880 293 aaKnown RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 CCNCP24863 283 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 KLHL30Q0D2K2 578 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 SLC17A1Q14916 467 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 TAF7Q15545 349 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 MAJINQ3KP22 176 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 RABL6Q3YEC7 729 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 ODF2Q5BJF6 829 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 AGAP6Q5VW22 663 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 CAPN13Q6MZZ7 669 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 HOOK3Q86VS8 718 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 CCDC71Q8IV32 467 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 NAXDQ8IW45 347 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 TUSC5Q8IXB3 177 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 OR8H3Q8N146 312 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 SLC22A18ASQ8N1D0 253 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 C11orf42Q8N5U0 333 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 Q8N7P7 452 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 ZNRF1Q8ND25 227 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 C16orf58Q96GQ5 468 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 PPP1R16AQ96I34 528 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 CNDP1Q96KN2 507 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 TMEM237Q96Q45 408 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 ZNF559Q9BR84 538 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 MLPHQ9BV36 600 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 YTHDF1Q9BYJ9 559 aaKnown RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 C2orf40Q9H1Z8 148 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 DPEP3Q9H4B8 488 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 ZNHIT6Q9NWK9 470 aaKnown RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 SEPT10Q9P0V9 454 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 CDH7Q9ULB5 785 aa2.51□□□□□ -2.01
SPG11-206ENST00000558093 ZNF256Q9Y2P7 627 aaPredicted RBP2.51□□□□□ -2.01
SPG11-206ENST00000558093 OR1A2Q9Y585 309 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms