RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TGFBR3LH3BV60 316 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ZFAND5O76080 213 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 IGKV3-11P04433 115 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 FAM87AP0C7U9 286 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 BCKDHAP12694 445 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 SDC1P18827 310 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 SOX11P35716 441 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ALDH9A1P49189 494 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 Q0VFX4 171 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 MFAP5Q13361 173 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 PDCD2Q16342 344 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-234ENST00000557703 DPY19L1Q2PZI1 675 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ABHD17BQ5VST6 288 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 HSDL2Q6YN16 418 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 LARP4Q71RC2 724 aaKnown RBP eCLIP12.77□□□□□ -0.37
SHMT2-234ENST00000557703 GALNT12Q8IXK2 581 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ZADH2Q8N4Q0 377 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 EXD3Q8N9H8 876 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 CEP70Q8NHQ1 597 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ZNF675Q8TD23 568 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ACTRT2Q8TDY3 377 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 PSMF1Q92530 271 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 HAS2Q92819 552 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 KLHL29Q96CT2 875 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 SENP5Q96HI0 755 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-234ENST00000557703 MAELQ96JY0 434 aaKnown RBP12.77□□□□□ -0.37
SHMT2-234ENST00000557703 C3orf30Q96M34 536 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ZNF681Q96N22 645 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 DEFB126Q9BYW3 111 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 NUF2Q9BZD4 464 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 CCDC134Q9H6E4 229 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 REEP4Q9H6H4 257 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 ZNF395Q9H8N7 513 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-234ENST00000557703 AKTIPQ9H8T0 292 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 CXorf21Q9HAI6 301 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 KCNK13Q9HB14 408 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 MRGBPQ9NV56 204 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 PNPOQ9NVS9 261 aa12.77□□□□□ -0.37
SHMT2-234ENST00000557703 POLR3HQ9Y535 204 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-234ENST00000557703 IGHV3-20A0A0C4DH32 117 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ATP6AP2A0A1C7CYW4 349 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 DYTNA2CJ06 578 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 GLOD5A6NK44 160 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 FCHO1O14526 889 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ERAL1O75616 437 aaKnown RBP12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ATP6AP2O75787 350 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 DNAJB5O75953 348 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ITGAMP11215 1152 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 NTSP30990 170 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 HPCAL1P37235 193 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 FUT7Q11130 342 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 PDE7AQ13946 482 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 IL23RQ5VWK5 629 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 PCSK4Q6UW60 755 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ASB18Q6ZVZ8 466 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 RPS19BP1Q86WX3 136 aaKnown RBP12.76□□□□□ -0.37
SHMT2-234ENST00000557703 OR4N5Q8IXE1 308 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 DND1Q8IYX4 353 aaKnown RBP12.76□□□□□ -0.37
SHMT2-234ENST00000557703 SHISA5Q8N114 240 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 HORMAD2Q8N7B1 307 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 C17orf47Q8NEP4 570 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ZFP28Q8NHY6 868 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 SLC2A12Q8TD20 617 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 SLC39A7Q92504 469 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 CTHRC1Q96CG8 243 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ZBED6CLQ96FA7 236 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-234ENST00000557703 NUDT9Q9BW91 350 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 EBPLQ9BY08 206 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ACSS1Q9NUB1 689 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-234ENST00000557703 TMEM45AQ9NWC5 275 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 STMN3Q9NZ72 180 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 HEY2Q9UBP5 337 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ATP6V1HQ9UI12 483 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 ANAPC2Q9UJX6 822 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 PCDHGB6Q9Y5F9 930 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 PTGDR2Q9Y5Y4 395 aa12.76□□□□□ -0.37
SHMT2-234ENST00000557703 A0A087WV62 115 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 A6NL46 340 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 MYO1GB0I1T2 1018 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 PLOD3O60568 738 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 SOX30O94993 753 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 DDAH2O95865 285 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 CLNS1AP54105 237 aaKnown RBP12.75□□□□□ -0.37
SHMT2-234ENST00000557703 CLDN8P56748 225 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 DCAF7P61962 342 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 SRSF11Q05519 484 aaKnown RBP12.75□□□□□ -0.37
SHMT2-234ENST00000557703 LRRC74AQ0VAA2 488 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 KLRB1Q12918 225 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 MLC1Q15049 377 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 GSTA3Q16772 222 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 MPEG1Q2M385 716 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 ACER2Q5QJU3 275 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 CAMKMTQ7Z624 323 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 TICAM1Q8IUC6 712 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 GPALPP1Q8IXQ4 340 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 VWA5B2Q8N398 1253 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 SLC15A4Q8N697 577 aa12.75□□□□□ -0.37
SHMT2-234ENST00000557703 BRIX1Q8TDN6 353 aaKnown RBP12.75□□□□□ -0.37
SHMT2-234ENST00000557703 ZNF721Q8TF20 911 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms