RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 NCOR1P1Q9H4R4 102 aa2.76□□□□□ -1.97
TRAV28-201ENST00000557548 FAM124BQ9H5Z6 455 aaPredicted RBP2.76□□□□□ -1.97
TRAV28-201ENST00000557548 RPAP3Q9H6T3 665 aaPredicted RBP2.76□□□□□ -1.97
TRAV28-201ENST00000557548 ATP13A3Q9H7F0 1226 aa2.76□□□□□ -1.97
TRAV28-201ENST00000557548 DDX31Q9H8H2 851 aaKnown RBP2.76□□□□□ -1.97
TRAV28-201ENST00000557548 ZNHIT6Q9NWK9 470 aaKnown RBP2.76□□□□□ -1.97
TRAV28-201ENST00000557548 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.76□□□□□ -1.97
TRAV28-201ENST00000557548 ATP6V1HQ9UI12 483 aa2.76□□□□□ -1.97
TRAV28-201ENST00000557548 MRPS7Q9Y2R9 242 aaKnown RBP2.76□□□□□ -1.97
TRAV28-201ENST00000557548 KLHDC2Q9Y2U9 406 aa2.76□□□□□ -1.97
TRAV28-201ENST00000557548 C2CD2Q9Y426 696 aa2.76□□□□□ -1.97
TRAV28-201ENST00000557548 RNF115Q9Y4L5 304 aa2.76□□□□□ -1.97
TRAV28-201ENST00000557548 SELENOKQ9Y6D0 94 aa2.76□□□□□ -1.97
TRAV28-201ENST00000557548 COL3A1P02461 1466 aaPredicted RBP2.76□□□□□ -1.97
TRAV28-201ENST00000557548 A8MUI8 341 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 LACTBL1A8MY62 500 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 CCSO14618 274 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 KLF11O14901 512 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 KIAA0513O60268 411 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 GPRIN2O60269 458 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 TRMUO75648 421 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 CDC123O75794 336 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 BBOX1O75936 387 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 RHOBTB1O94844 696 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 HPRP00739 348 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 VTNP04004 478 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ATP1A1P05023 1023 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ANXA4P09525 319 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 TOP1P11387 765 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 TSPAN8P19075 237 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 OTX2P32243 289 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 CA8P35219 290 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 TAGLN2P37802 199 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 SOX3P41225 446 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 FHITP49789 147 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 NAPAP54920 295 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 XGP55808 180 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 RPS4XP62701 263 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 CNTN2Q02246 1040 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 EXOSC2Q13868 293 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 P2RY14Q15391 338 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ZSWIM7Q19AV6 140 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 IZUMO4Q1ZYL8 232 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 GTDC1Q4AE62 458 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 RABGAP1LQ5R372 815 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 NADSYN1Q6IA69 706 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 NIPAL3Q6P499 406 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 SLC39A4Q6P5W5 647 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 LRRC8BQ6P9F7 803 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 SLC25A47Q6Q0C1 308 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 FIP1L1Q6UN15 594 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 CBLN3Q6UW01 205 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 PRSS57Q6UWY2 283 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ANGPTL8Q6UXH0 198 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF730Q6ZMV8 503 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 SH2D5Q6ZV89 423 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ASRGL1Q7L266 308 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 GOLGA7Q7Z5G4 137 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 LHFPL4Q7Z7J7 247 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 TRPT1Q86TN4 253 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 MARVELD2Q8N4S9 558 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 STPG4Q8N801 248 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 NIPA2Q8N8Q9 360 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 EIF1ADQ8N9N8 165 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 POC1AQ8NBT0 407 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 STEAP2Q8NFT2 490 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 WDR36Q8NI36 951 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 C8orf46Q8TAG6 207 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 RDH11Q8TC12 318 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 RNF139Q8WU17 664 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 TM9SF4Q92544 642 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 DYRK2Q92630 601 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 OSTF1Q92882 214 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 AZIN2Q96A70 460 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 PINX1Q96BK5 328 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 TUBGCP3Q96CW5 907 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 LRR1Q96L50 414 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 FAM210AQ96ND0 272 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 INPP4AQ96PE3 977 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 FCRL4Q96PJ5 515 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 DUX5Q96PT3 197 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 DCTN5Q9BTE1 182 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ALG12Q9BV10 488 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 VCX2Q9H322 139 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 FNDC4Q9H6D8 234 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 C6orf106Q9H6K1 298 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 COG4Q9H9E3 785 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 SLC25A19Q9HC21 320 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 UBE2TQ9NPD8 197 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 MAN2C1Q9NTJ4 1040 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 RBM28Q9NW13 759 aaKnown RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 GDAP2Q9NXN4 497 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 SUN2Q9UH99 717 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 CFAP45Q9UL16 551 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 B9D1Q9UPM9 204 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 SLC6A5Q9Y345 797 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 CAB39Q9Y376 341 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF175Q9Y473 711 aa2.75□□□□□ -1.97
TRAV28-201ENST00000557548 KLF2Q9Y5W3 355 aaPredicted RBP2.75□□□□□ -1.97
TRAV28-201ENST00000557548 DDX49Q9Y6V7 483 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms