RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SACM1LQ9NTJ5 587 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 DEPPQ9NTK1 212 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 CNIH4Q9P003 139 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 TMEM216Q9P0N5 145 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 TINAGQ9UJW2 476 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 PSME2Q9UL46 239 aa10.95□□□□□ -0.66
VRK1-204ENST00000555351 MYOCOSA0A1B0GUC4 107 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 SERTM1A2A2V5 107 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 OR14I1A6ND48 311 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 GOLGA6L10A6NI86 522 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 CAPN14A8MX76 684 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 DLX3O60479 287 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 SUPT7LO94864 414 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 NADKO95544 446 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 PDYNP01213 254 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 IGHG3P01860 377 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 P04436 131 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ENO1P06733 434 aaKnown RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 KLK1P06870 262 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 FBXO45P0C2W1 286 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 SERPINB3P29508 390 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 GSTM5P46439 218 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 MAPK12P53778 367 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 CDH13P55290 713 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ERVK-8P63133 956 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ADORA2A-AS1P86434 159 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 GALNT1Q10472 559 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 FUT7Q11130 342 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ASPHQ12797 758 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 LCP2Q13094 533 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ZNF267Q14586 743 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 EBPQ15125 230 aaKnown RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 ZNF630Q2M218 657 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 UNC50Q53HI1 259 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 CCNYL2Q5T2Q4 361 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 SLC22A10Q63ZE4 541 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ZNF787Q6DD87 383 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 HIST2H2BCQ6DN03 193 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 SLC48A1Q6P1K1 146 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 LYPD8Q6UX82 237 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 C16orf47Q6ZP98 133 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 DGAT2L6Q6ZPD8 337 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 COMMD6Q7Z4G1 85 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 DOLPP1Q86YN1 238 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 TICAM1Q8IUC6 712 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 HOMEZQ8IX15 550 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 TAGAPQ8N103 731 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 OR7G1Q8NGA0 311 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 FAM57AQ8TBR7 257 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 PAQR8Q8TEZ7 354 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 SELENOMQ8WWX9 145 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 PPWD1Q96BP3 646 aaKnown RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 MTFMTQ96DP5 389 aaKnown RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 SPACA9Q96E40 222 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 WWTR1Q9GZV5 400 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 LIN28AQ9H9Z2 209 aaKnown RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 IL1RL2Q9HB29 575 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 TEX10Q9NXF1 929 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 VPS29Q9UBQ0 182 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ZNF225Q9UK10 706 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 CES1P1Q9UKY3 287 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 SLC12A4Q9UP95 1085 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 ERVK-19Q9WJR5 959 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 PCDHA9Q9Y5H5 950 aa10.94□□□□□ -0.66
VRK1-204ENST00000555351 DIDO1Q9BTC0 2240 aaKnown RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
VRK1-204ENST00000555351 A0A1B0GTL3 188 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 ANKRD33BA6NCL7 494 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 GLOD5A6NK44 160 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 PRSS44E7EML9 344 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 MANBAO00462 879 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 PPP6CO00743 305 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 ADAM10O14672 748 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 PGRMC2O15173 223 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 HS6ST1O60243 411 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 SUSD5O60279 629 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 GLRA3O75311 464 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 ULK1O75385 1050 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 PRKRAO75569 313 aaKnown RBP10.93□□□□□ -0.66
VRK1-204ENST00000555351 ATP1B1P05026 303 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 CPMP14384 443 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 PORP16435 677 aaPredicted RBP10.93□□□□□ -0.66
VRK1-204ENST00000555351 COL8A1P27658 744 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 PTGER1P34995 402 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 GPR85P60893 370 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 PPIAP62937 165 aaKnown RBP10.93□□□□□ -0.66
VRK1-204ENST00000555351 PLGLB1Q02325 96 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 FOXO1Q12778 655 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 NTRK2Q16620 822 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 ZNF750Q32MQ0 723 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 TBCELQ5QJ74 424 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 TEX35Q5T0J7 233 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 C6orf163Q5TEZ5 329 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 SP5Q6BEB4 398 aaPredicted RBP10.93□□□□□ -0.66
VRK1-204ENST00000555351 GPRIN3Q6ZVF9 776 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 FGD2Q7Z6J4 655 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 GALNT12Q8IXK2 581 aa10.93□□□□□ -0.66
VRK1-204ENST00000555351 SAMD14Q8IZD0 417 aaPredicted RBP10.93□□□□□ -0.66
VRK1-204ENST00000555351 FBXW8Q8N3Y1 598 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms