RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 SGF29Q96ES7 293 aa5□□□□□ -1.61
PCNX1-205ENST00000553508 PRMT1Q99873 361 aaKnown RBP5□□□□□ -1.61
PCNX1-205ENST00000553508 SP140LQ9H930 580 aa5□□□□□ -1.61
PCNX1-205ENST00000553508 MARCH7Q9H992 704 aa5□□□□□ -1.61
PCNX1-205ENST00000553508 UBE2TQ9NPD8 197 aaPredicted RBP5□□□□□ -1.61
PCNX1-205ENST00000553508 NUDCQ9Y266 331 aa5□□□□□ -1.61
PCNX1-205ENST00000553508 VSIG4Q9Y279 399 aa5□□□□□ -1.61
PCNX1-205ENST00000553508 HBS1LQ9Y450 684 aaKnown RBP5□□□□□ -1.61
PCNX1-205ENST00000553508 DLEC1Q9Y238 1755 aa5□□□□□ -1.61
PCNX1-205ENST00000553508 NPC1L1Q9UHC9 1359 aa5□□□□□ -1.61
PCNX1-205ENST00000553508 KIF7Q2M1P5 1343 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 ADAMTS7Q9UKP4 1686 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 UBR2Q8IWV8 1755 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 A0A0B4J203 849 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 C2orf92A0A1B0GVN3 265 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 KLLNB2CW77 178 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 OR6B1O95007 311 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 ZFYP08048 801 aaPredicted RBP4.99□□□□□ -1.61
PCNX1-205ENST00000553508 TSPY3P0CV98 308 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 TSPY8P0CW00 308 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 TIA1P31483 386 aaKnown RBP eCLIP4.99□□□□□ -1.61
PCNX1-205ENST00000553508 RPP38P78345 283 aaKnown RBP4.99□□□□□ -1.61
PCNX1-205ENST00000553508 TSPY1Q01534 308 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 CYLC2Q14093 348 aaPredicted RBP4.99□□□□□ -1.61
PCNX1-205ENST00000553508 CAVIN1Q6NZI2 390 aaKnown RBP4.99□□□□□ -1.61
PCNX1-205ENST00000553508 ANKRD46Q86W74 232 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 HIPK1Q86Z02 1210 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 ITLN1Q8WWA0 313 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 ZNF274Q96GC6 653 aaPredicted RBP4.99□□□□□ -1.61
PCNX1-205ENST00000553508 ANKRD27Q96NW4 1050 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 PINK1Q9BXM7 581 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 ZNF581Q9P0T4 197 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 MGAT4AQ9UM21 535 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 NIP7Q9Y221 180 aaKnown RBP eCLIP4.99□□□□□ -1.61
PCNX1-205ENST00000553508 TIAM2Q8IVF5 1701 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 NRXN2Q9P2S2 1712 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 SCN7AQ01118 1682 aa4.99□□□□□ -1.61
PCNX1-205ENST00000553508 TRAV34A0A0B4J273 112 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 TRBV5-4A0A0C4DH59 114 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 CCDC162PA2VCL2 907 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 FBP2O00757 339 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 VENTXO95231 258 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 SEMA4FO95754 770 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 RLN1P04808 185 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 FAM200BP0CF97 657 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 KLK2P20151 261 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 NPBWR1P48145 328 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 RPS27AP62979 156 aaKnown RBP4.98□□□□□ -1.61
PCNX1-205ENST00000553508 SLC39A6Q13433 755 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 POM121L1PQ3SYA9 428 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 ZNF506Q5JVG8 444 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 TBC1D10CQ8IV04 446 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 KIAA0895Q8NCT3 520 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 OR1B1Q8NGR6 318 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 RUNDC3BQ96NL0 473 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 LIME1Q9H400 295 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 SH3GLB2Q9NR46 395 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 THYN1Q9P016 225 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 GIMAP2Q9UG22 337 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 ATRXP46100 2492 aa4.98□□□□□ -1.61
PCNX1-205ENST00000553508 AFDNP55196 1824 aaKnown RBP4.97□□□□□ -1.61
PCNX1-205ENST00000553508 TEX48A0A1B0GUV7 120 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 THY1P04216 161 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 GP5P40197 560 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 MATKP42679 507 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 CEACAM7Q14002 265 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 RFTN2Q52LD8 501 aaPredicted RBP4.97□□□□□ -1.61
PCNX1-205ENST00000553508 TEX35Q5T0J7 233 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 RNLSQ5VYX0 342 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 PRR5LQ6MZQ0 368 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 NEPROQ6NW34 567 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 NBPF5PQ86XG9 351 aaPredicted RBP4.97□□□□□ -1.61
PCNX1-205ENST00000553508 ELMOD1Q8N336 334 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 CARNMT1Q8N4J0 409 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 GPR148Q8TDV2 347 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 RCHY1Q96PM5 261 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 LSG1Q9H089 658 aaKnown RBP4.97□□□□□ -1.61
PCNX1-205ENST00000553508 ABCD2Q9UBJ2 740 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 TMED7Q9Y3B3 224 aa4.97□□□□□ -1.61
PCNX1-205ENST00000553508 VIRMAQ69YN4 1812 aaKnown RBP4.97□□□□□ -1.61
PCNX1-205ENST00000553508 SBF1O95248 1867 aa4.96□□□□□ -1.61
PCNX1-205ENST00000553508 CEMIPQ8WUJ3 1361 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 ANKDD1BA6NHY2 528 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 CTDSPLO15194 276 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 ST8SIA3O43173 380 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 HTATSF1O43719 755 aaKnown RBP4.96□□□□□ -1.62
PCNX1-205ENST00000553508 SCO2O43819 266 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 PRKAR2BP31323 418 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 ELK3P41970 407 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 NHLRC3Q5JS37 347 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 PM20D1Q6GTS8 502 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 METTL23Q86XA0 190 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 C4orf19Q8IY42 314 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 THNSL1Q8IYQ7 743 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 PCNPQ8WW12 178 aaKnown RBP4.96□□□□□ -1.62
PCNX1-205ENST00000553508 SEPT8Q92599 483 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 POMT1Q9Y6A1 747 aa4.96□□□□□ -1.62
PCNX1-205ENST00000553508 ILVBLA1L0T0 632 aa4.95□□□□□ -1.62
PCNX1-205ENST00000553508 P2RX6O15547 441 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms