RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	TIGD1	Q96MW7	591 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	KRT12	Q99456	494 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SLC39A3	Q9BRY0	314 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	DOHH	Q9BU89	302 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CACNG6	Q9BXT2	260 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	UBQLN3	Q9H347	655 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ADAP2	Q9NPF8	381 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	NLE1	Q9NVX2	485 aa	Predicted RBP	5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ARL15	Q9NXU5	204 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ELOVL5	Q9NYP7	299 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SPATA7	Q9P0W8	599 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RSPH14	Q9UHP6	348 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	DUSP13	Q9UII6	198 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	HOOK1	Q9UJC3	728 aa	Known RBP	5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ANAPC7	Q9UJX3	599 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CNOT11	Q9UKZ1	510 aa	Known RBP	5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RNF115	Q9Y4L5	304 aa		5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	5.3	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ARHGAP32	A7KAX9	2087 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	IGHV4-61	A0A0C4DH41	118 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CCDC162P	A2VCL2	907 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	C4orf51	C9J302	202 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260		H7C0S8	307 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	TRIM77	I1YAP6	450 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	APOL1	O14791	398 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SMAD9	O15198	467 aa	Known RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	TRIM3	O75382	744 aa	Predicted RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	PRB2	P02812	416 aa	Predicted RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CYP1A2	P05177	515 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RBP3	P10745	1247 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	KDELR1	P24390	212 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	FMO4	P31512	558 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SLC6A12	P48065	614 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RPS15A	P62244	130 aa	Known RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	MEF2A	Q02078	507 aa	Predicted RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RELA	Q04206	551 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ZNF844	Q08AG5	666 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	GAB1	Q13480	694 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SEMA3A	Q14563	771 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	NRF1	Q16656	503 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CYP1B1	Q16678	543 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	HADH	Q16836	314 aa	Known RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SLC9A4	Q6AI14	798 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CLNK	Q7Z7G1	428 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ASPG	Q86U10	573 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	POU5F2	Q8N7G0	328 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	FAM83F	Q8NEG4	500 aa	Predicted RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	NUP43	Q8NFH3	380 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	OR9A1P	Q8NGU1	263 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SLC13A3	Q8WWT9	602 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	UCN3	Q969E3	161 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CAVIN3	Q969G5	261 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ZNF845	Q96IR2	970 aa	Predicted RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ZNF597	Q96LX8	424 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ADAD1	Q96M93	576 aa	Known RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	PKP4	Q99569	1192 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RBM4	Q9BWF3	364 aa	Known RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	OR8D2	Q9GZM6	311 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ACBD3	Q9H3P7	528 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	C10orf88	Q9H8K7	445 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	MRPL47	Q9HD33	250 aa	Known RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	UTP6	Q9NYH9	597 aa	Known RBP	5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	AIPL1	Q9NZN9	384 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	IP6K2	Q9UHH9	426 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SLC22A7	Q9Y694	548 aa		5.29	□□□□□ -1.56
RACGAP1-223	ENST00000551260	KCNE1B	A0A087WTH5	132 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CTAGE15	A4D2H0	777 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	LRP5L	A4QPB2	252 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	C3orf70	A6NLC5	250 aa	Predicted RBP	5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	VWC2L	B2RUY7	222 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	PLOD2	O00469	737 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	NRDC	O43847	1150 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CEP104	O60308	925 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RAMP1	O60894	148 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SHOX2	O60902	331 aa	Predicted RBP	5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CCNDBP1	O95273	360 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CD3E	P07766	207 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CPN1	P15169	458 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	PECAM1	P16284	738 aa	Predicted RBP	5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	ALOX12	P18054	663 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	MSN	P26038	577 aa	Known RBP	5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	IL2RG	P31785	369 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	PNLIPRP1	P54315	467 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	GEM	P55040	296 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	C21orf58	P58505	322 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	HILS1	P60008	231 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	RAB8A	P61006	207 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	EGR3	Q06889	387 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	SRSF4	Q08170	494 aa	Known RBP	5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	KIF5A	Q12840	1032 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	HERC3	Q15034	1050 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	TERF2	Q15554	542 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	PIGG	Q5H8A4	983 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	TCP11X2	Q5H9J9	407 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	NCMAP	Q5T1S8	102 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	THEMIS2	Q5TEJ8	643 aa		5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	CAPN13	Q6MZZ7	669 aa	Predicted RBP	5.28	□□□□□ -1.56
RACGAP1-223	ENST00000551260	STAC2	Q6ZMT1	411 aa		5.28	□□□□□ -1.56

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