RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ZNF160Q9HCG1 818 aa15.21■□□□□ 0.03
LIMS2-217ENST00000545738 SH3BP4Q9P0V3 963 aa15.21■□□□□ 0.03
LIMS2-217ENST00000545738 ZNF223Q9UK11 482 aaPredicted RBP15.21■□□□□ 0.03
LIMS2-217ENST00000545738 MYO1GB0I1T2 1018 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 DNAJB5O75953 348 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 DDAH2O95865 285 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 CLPSP04118 112 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 SLC35E2P0CK97 266 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 COX7A2P14406 83 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 FRKP42685 505 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 GPR143P51810 404 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 DGKQP52824 942 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 MRPS35P82673 323 aaKnown RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 GSTA3Q16772 222 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 ZNF551Q7Z340 670 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 CAMKMTQ7Z624 323 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 PIGWQ7Z7B1 504 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 RAB43Q86YS6 212 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 APCDD1LQ8NCL9 501 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 OR9A2Q8NGT5 310 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 PPCDCQ96CD2 204 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 COQ8BQ96D53 544 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 ZNF764Q96H86 408 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 DPY30Q9C005 99 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 GLIPR2Q9H4G4 154 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 ADAP2Q9NPF8 381 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 PIEZO2Q9H5I5 2752 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 SAGE2PA6NJ88 616 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 NME6O75414 186 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 IGHEP01854 428 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 IFNA16P05015 189 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 ATP1B1P05026 303 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 PORP16435 677 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 NCF2P19878 526 aaPredicted RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 HPCAL1P37235 193 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 MRPL19P49406 292 aaKnown RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 DUSP8Q13202 625 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 SERTAD2Q14140 314 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 UBAP2LQ14157 1087 aaKnown RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 ELAVL1Q15717 326 aaKnown RBP15.2■□□□□ 0.02
LIMS2-217ENST00000545738 PRICKLE4Q2TBC4 344 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 DEFB109BQ30KR1 87 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 FAM174BQ3ZCQ3 159 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 DCAF10Q5QP82 559 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 OR4F3Q6IEY1 312 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 FAM111BQ6SJ93 734 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 CPLX4Q7Z7G2 160 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 KIF2BQ8N4N8 673 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 NACC2Q96BF6 587 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 TESCQ96BS2 214 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 AMDHD1Q96NU7 426 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 CCT8L2Q96SF2 557 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 TRIM4Q9C037 500 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 NMUR2Q9GZQ4 415 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 CXorf21Q9HAI6 301 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 SLC52A3Q9NQ40 469 aa15.2■□□□□ 0.02
LIMS2-217ENST00000545738 ARGFXA6NJG6 315 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 C17orf105B2RV13 164 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 S1PR1P21453 382 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 TMPRSS3P57727 454 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 SLC26A5P58743 744 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 CXADRP78310 365 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 PLIN5Q00G26 463 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 VAC14Q08AM6 782 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 NDUFAF7Q7L592 441 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 PARP9Q8IXQ6 854 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 CLECL1Q8IZS7 167 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 MIER2Q8N344 545 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 LRRC25Q8N386 305 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-217ENST00000545738 SNRNP27Q8WVK2 155 aaKnown RBP15.19■□□□□ 0.02
LIMS2-217ENST00000545738 MTERF3Q96E29 417 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 DGAT2Q96PD7 388 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 MAT2BQ9NZL9 334 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 ZIM2Q9NZV7 527 aa15.19■□□□□ 0.02
LIMS2-217ENST00000545738 ASPDHA6ND91 283 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 PDPK1O15530 556 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 PRKNO60260 465 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-217ENST00000545738 SLC22A3O75751 556 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 C1QCP02747 245 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 IGKV3-11P04433 115 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 CSNK2A2P19784 350 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-217ENST00000545738 SSTR4P31391 388 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 PGDP52209 483 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 PGS1Q32NB8 556 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 TRMT12Q53H54 448 aaKnown RBP15.18■□□□□ 0.02
LIMS2-217ENST00000545738 ZNF628Q5EBL2 1059 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 CPTPQ5TA50 214 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 ANKRD46Q86W74 232 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 SLC2A12Q8TD20 617 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 ZNF721Q8TF20 911 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 KAT2AQ92830 837 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 CTHRC1Q96CG8 243 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 RBM18Q96H35 190 aaKnown RBP15.18■□□□□ 0.02
LIMS2-217ENST00000545738 LPAR4Q99677 370 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 DUSP26Q9BV47 211 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 SAR1AQ9NR31 198 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 C19orf25Q9UFG5 118 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-217ENST00000545738 PSME2Q9UL46 239 aa15.18■□□□□ 0.02
LIMS2-217ENST00000545738 PPIEQ9UNP9 301 aaKnown RBP15.18■□□□□ 0.02
LIMS2-217ENST00000545738 KCNMB2Q9Y691 235 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms