RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ZFYVE19Q96K21 471 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 FYTTD1Q96QD9 318 aaKnown RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 ZNF607Q96SK3 696 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 COQ7Q99807 217 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 RIOK2Q9BVS4 552 aaKnown RBP8.31□□□□□ -1.08
TDP1-204ENST00000545686 SLC6A16Q9GZN6 736 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 EPHX3Q9H6B9 360 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PLSCR3Q9NRY6 295 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 SEMA3GQ9NS98 782 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PHF11Q9UIL8 331 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 MAFFQ9ULX9 164 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 GSTK1Q9Y2Q3 226 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 PCDHGB7Q9Y5F8 929 aa8.31□□□□□ -1.08
TDP1-204ENST00000545686 A0A1W2PRQ8 180 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 WWP2O00308 870 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 PLA2G10O15496 165 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ARHGEF9O43307 516 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 MMP20O60882 483 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 SEMA7AO75326 666 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 C1QBP02746 253 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 GBAP04062 536 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 URODP06132 367 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 CKMP06732 381 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 KLK1P06870 262 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ATXN8OSP0DMR3 200 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 CFL1P23528 166 aaKnown RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 HLA-FP30511 346 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 GABRA5P31644 462 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 GPC1P35052 558 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 CTSCP53634 463 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 DAB2P98082 770 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 MXD1Q05195 221 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 CNTN1Q12860 1018 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 FAPQ12884 760 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 GPR19Q15760 415 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 PRSS53Q2L4Q9 553 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ZNF658BQ4V348 819 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 LRRC73Q5JTD7 316 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ATAT1Q5SQI0 421 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 C22orf42Q6IC83 251 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 CD200R1LQ6Q8B3 271 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 NXPE4Q6UWF7 544 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 Q6ZVL8 140 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 GPR65Q8IYL9 337 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 HORMAD2Q8N7B1 307 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 DUSP18Q8NEJ0 188 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 FGF11Q92914 225 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 GLYATL1Q969I3 302 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 SOSTQ9BQB4 213 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 KATNB1Q9BVA0 655 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 TMEM121BQ9BXQ6 578 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 OR51B5Q9H339 312 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 MRPL17Q9NRX2 175 aaKnown RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 RBFOX1Q9NWB1 397 aaKnown RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 AHSPQ9NZD4 102 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 FAM8A1Q9UBU6 413 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 EXOSC1Q9Y3B2 195 aaKnown RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 SF3B6Q9Y3B4 125 aaKnown RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 BOLA1Q9Y3E2 137 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 A0A1W2PQ45 241 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 A0A1W2PQY0 241 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 PRKYO43930 277 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 NME6O75414 186 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 TGFB1P01137 390 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 PRKAR1AP10644 381 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ACP2P11117 423 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 DDCP20711 480 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ALAS2P22557 587 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ETV5P41161 510 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 IL12RB1P42701 662 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 TGM4P49221 684 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 GZMKP49863 264 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ETV1P50549 477 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 EFNB1P98172 346 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 CD83Q01151 205 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 SREBF2Q12772 1141 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 TARDBPQ13148 414 aaKnown RBP eCLIP8.3□□□□□ -1.08
TDP1-204ENST00000545686 EFR3AQ14156 821 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
TDP1-204ENST00000545686 RPS26P11Q5JNZ5 115 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 TRIQKQ629K1 86 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 PAQR6Q6TCH4 344 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 LRRC56Q8IYG6 542 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 CHST14Q8NCH0 376 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 TMEM163Q8TC26 289 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 UBASH3BQ8TF42 649 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 MRPS31Q92665 395 aaKnown RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 UFD1Q92890 307 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 FOXJ1Q92949 421 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 MED30Q96HR3 178 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ZNF582Q96NG8 517 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 SH2B3Q9UQQ2 575 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 ASB4Q9Y574 426 aa8.3□□□□□ -1.08
TDP1-204ENST00000545686 SPIN1Q9Y657 262 aaPredicted RBP8.3□□□□□ -1.08
TDP1-204ENST00000545686 LINC00854A0A1B0GVQ3 168 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.29□□□□□ -1.08
TDP1-204ENST00000545686 PRODHO43272 600 aa8.29□□□□□ -1.08
TDP1-204ENST00000545686 TLX2O43763 284 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms