RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 CLN6Q9NWW5 311 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 WBP1LQ9NX94 342 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 MS4A12Q9NXJ0 267 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 DAPK2Q9UIK4 370 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 WDR37Q9Y2I8 494 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 PCDHGA3Q9Y5H0 932 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 GPC6Q9Y625 555 aaPredicted RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 STON1Q9Y6Q2 735 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 IGKV1-8A0A0C4DH67 115 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TRBV4-1A0A0J9YWV2 114 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 LRIT2A6NDA9 550 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ANHXE9PGG2 379 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 CNOT3O75175 753 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 PCDH8O95206 1070 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 H1F0P07305 194 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 NAT1P18440 290 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 FUT4P22083 530 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 CDH3P22223 829 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 GADD45AP24522 165 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 PPP2R1BP30154 601 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SSR2P43308 183 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TSFMP43897 325 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 KHKP50053 298 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ANXA11P50995 505 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 PSMD7P51665 324 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ABATP80404 500 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ALDH6A1Q02252 535 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 DCST1Q5T197 706 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SLX4IPQ5VYV7 408 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 C12orf73Q69YU5 71 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TANGO2Q6ICL3 276 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 KRT73Q86Y46 540 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 AMER2Q8N7J2 671 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 OR2A1Q8NGT9 310 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 MCFD2Q8NI22 146 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 FAM131CQ96AQ9 280 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 MOAP1Q96BY2 351 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 CHFRQ96EP1 664 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 FAM210AQ96ND0 272 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 AMDHD1Q96NU7 426 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 CAMK1GQ96NX5 476 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 FERD3LQ96RJ6 166 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 NRTNQ99748 197 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TREX2Q9BQ50 279 aaPredicted RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 MVB12BQ9H7P6 319 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 SLC25A19Q9HC21 320 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 ZBTB20Q9HC78 741 aaPredicted RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 AMBNQ9NP70 447 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 MBNL1Q9NR56 388 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 DZANK1Q9NVP4 752 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
PTPRO-208ENST00000542557 CDV3Q9UKY7 258 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 KIAA0100Q14667 2235 aaKnown RBP6.2□□□□□ -1.42
PTPRO-208ENST00000542557 TRPM6Q9BX84 2022 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 TAF4O00268 1085 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 LCMT2O60294 686 aaKnown RBP6.19□□□□□ -1.42
PTPRO-208ENST00000542557 SEMA7AO75326 666 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 APODP05090 189 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 ACP5P13686 325 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 POU2F1P14859 743 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 MYOGP15173 224 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 PORP16435 677 aaPredicted RBP6.19□□□□□ -1.42
PTPRO-208ENST00000542557 NTSP30990 170 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 CNR2P34972 360 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 AHRP35869 848 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 RGS6P49758 472 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 PPP5CP53041 499 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 UGT2B15P54855 530 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 ERVK-21P61565 698 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRO-208ENST00000542557 TP53BP2Q13625 1128 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 TIMM50Q3ZCQ8 353 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 NDUFAF5Q5TEU4 345 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 PRAMEF8Q5VWM4 474 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 PRAMEF7Q5VXH5 474 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 MEDAGQ5VYS4 303 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 RNLSQ5VYX0 342 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 MRM1Q6IN84 353 aaKnown RBP6.19□□□□□ -1.42
PTPRO-208ENST00000542557 FAM180BQ6P0A1 224 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 CD300LDQ6UXZ3 194 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.19□□□□□ -1.42
PTPRO-208ENST00000542557 ZNF793Q6ZN11 406 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 NUDT18Q6ZVK8 323 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 PTCHD4Q6ZW05 846 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 LACC1Q8IV20 430 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 LINC00471Q8N535 108 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 TBC1D19Q8N5T2 526 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 NKAIN3Q8N8D7 197 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 IL17RCQ8NAC3 791 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 RAB8BQ92930 207 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 ITPKCQ96DU7 683 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 Q96MT0 163 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 DPH7Q9BTV6 452 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 SPATA5L1Q9BVQ7 753 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 RSPO3Q9BXY4 272 aaPredicted RBP6.19□□□□□ -1.42
PTPRO-208ENST00000542557 AICDAQ9GZX7 198 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 GLIPR2Q9H4G4 154 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 SLC35C2Q9NQQ7 365 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 SEMA3GQ9NS98 782 aa6.19□□□□□ -1.42
PTPRO-208ENST00000542557 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms