RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TEKT1Q969V4 418 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 PNPLA2Q96AD5 504 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 RBM18Q96H35 190 aaKnown RBP4.4□□□□□ -1.71
YBX3-210ENST00000540975 GUCD1Q96NT3 240 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 PANX3Q96QZ0 392 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 NUSAP1Q9BXS6 441 aaKnown RBP4.4□□□□□ -1.71
YBX3-210ENST00000540975 WWP1Q9H0M0 922 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 ABCB10Q9NRK6 738 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.4□□□□□ -1.71
YBX3-210ENST00000540975 RCOR3Q9P2K3 495 aaPredicted RBP4.4□□□□□ -1.71
YBX3-210ENST00000540975 Q9UF83 564 aa4.4□□□□□ -1.71
YBX3-210ENST00000540975 SCRIBQ14160 1630 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 ZSCAN5CA6NGD5 496 aaPredicted RBP4.39□□□□□ -1.71
YBX3-210ENST00000540975 HAT1O14929 419 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 MCF2LO15068 1137 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
YBX3-210ENST00000540975 TRPC1P48995 793 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 NFE2L1Q14494 772 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 OR1C1Q15619 314 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 WSCD2Q2TBF2 565 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 KBTBD12Q3ZCT8 623 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 ZNF789Q5FWF6 425 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 ABRAXAS1Q6UWZ7 409 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 CCDC83Q8IWF9 413 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 SLC22A18ASQ8N1D0 253 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 OR4F5Q8NH21 305 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 ZBED6CLQ96FA7 236 aaPredicted RBP4.39□□□□□ -1.71
YBX3-210ENST00000540975 S1PR3Q99500 378 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 AGPAT1Q99943 283 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 ELL3Q9HB65 397 aaPredicted RBP4.39□□□□□ -1.71
YBX3-210ENST00000540975 CGNQ9P2M7 1197 aaKnown RBP4.39□□□□□ -1.71
YBX3-210ENST00000540975 TMCC3Q9ULS5 477 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 RNF24Q9Y225 148 aa4.39□□□□□ -1.71
YBX3-210ENST00000540975 TTI1O43156 1089 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 STX6O43752 255 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 RHBDL1O75783 438 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 ANXA9O76027 345 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 FCGR3AP08637 254 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 CCDC172P0C7W6 258 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 PPP2R1BP30154 601 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 TCF7P36402 384 aaPredicted RBP4.38□□□□□ -1.71
YBX3-210ENST00000540975 LYZP61626 148 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 IGLV3-21P80748 117 aaPredicted RBP4.38□□□□□ -1.71
YBX3-210ENST00000540975 DCAF12Q5T6F0 453 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 C16orf87Q6PH81 154 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 LINC00696Q6ZRV3 163 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 LCA5Q86VQ0 697 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 IQCF2Q8IXL9 164 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 CLYBLQ8N0X4 340 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 ICA1LQ8NDH6 482 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 CHDHQ8NE62 594 aaPredicted RBP4.38□□□□□ -1.71
YBX3-210ENST00000540975 AP2M1Q96CW1 435 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 PPP1R16AQ96I34 528 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 ADPGKQ9BRR6 497 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 GRPEL1Q9HAV7 217 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 IL1RL2Q9HB29 575 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 GDF3Q9NR23 364 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 ABCC13Q9NSE7 274 aa4.38□□□□□ -1.71
YBX3-210ENST00000540975 UTP6Q9NYH9 597 aaKnown RBP4.38□□□□□ -1.71
YBX3-210ENST00000540975 ZNF256Q9Y2P7 627 aaPredicted RBP4.38□□□□□ -1.71
YBX3-210ENST00000540975 C13orf42A0A1B0GVH6 325 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 A4D1N5 150 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 SLC33A1O00400 549 aaPredicted RBP4.37□□□□□ -1.71
YBX3-210ENST00000540975 PSMA7O14818 248 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 LY6G6DO95868 133 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 TPM2P07951 284 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 ZNF853P0CG23 659 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 HSD17B1P14061 328 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 FASP25445 335 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 CHRNA3P32297 505 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 SERPINB6P35237 376 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 HMGCLP35914 325 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 P2RY14Q15391 338 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 C1orf189Q5VU69 101 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 ARMC3Q5W041 872 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 OTUD6AQ7L8S5 288 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 ITIH5Q86UX2 942 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 TBCKQ8TEA7 893 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 TTYH2Q9BSA4 534 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 YTHDF1Q9BYJ9 559 aaKnown RBP4.37□□□□□ -1.71
YBX3-210ENST00000540975 KRTAP4-4Q9BYR3 166 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 COPS7BQ9H9Q2 264 aaPredicted RBP4.37□□□□□ -1.71
YBX3-210ENST00000540975 AMBNQ9NP70 447 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 TECRQ9NZ01 308 aaKnown RBP4.37□□□□□ -1.71
YBX3-210ENST00000540975 RSPH14Q9UHP6 348 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 KIF16BQ96L93 1317 aa4.37□□□□□ -1.71
YBX3-210ENST00000540975 TOP2AP11388 1531 aaKnown RBP4.36□□□□□ -1.71
YBX3-210ENST00000540975 MROH2BQ7Z745 1585 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 SH3PXD2BA1X283 911 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 SAP18O00422 153 aaKnown RBP4.36□□□□□ -1.71
YBX3-210ENST00000540975 ASIC1P78348 528 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 YWHAHQ04917 246 aaPredicted RBP4.36□□□□□ -1.71
YBX3-210ENST00000540975 GIT2Q14161 759 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 RPS6KA1Q15418 735 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 TYSND1Q2T9J0 566 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 CNPY1Q3B7I2 92 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 C14orf28Q4W4Y0 310 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 HECTD3Q5T447 861 aa4.36□□□□□ -1.71
YBX3-210ENST00000540975 CGB2Q6NT52 195 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms