RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FERD3L	Q96RJ6	166 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MGLL	Q99685	303 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NIPSNAP1	Q9BPW8	284 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EDEM2	Q9BV94	578 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ASPN	Q9BXN1	380 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	BARHL1	Q9BZE3	327 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PCBD2	Q9H0N5	130 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MTG2	Q9H4K7	406 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF226	Q9NYT6	803 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NUDT4	Q9NZJ9	180 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GPR34	Q9UPC5	381 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRSS21	Q9Y6M0	314 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CPED1	A4D0V7	1026 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLC28A1	O00337	649 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FLRT2	O43155	660 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SCO1	O75880	301 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LDOC1	O95751	146 aa	Predicted RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PTPN6	P29350	595 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MMP12	P39900	470 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HNF4A	P41235	474 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KRT6C	P48668	564 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DCDC1	P59894	354 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HSPA14	Q0VDF9	509 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DDX39B	Q13838	428 aa	Known RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NR0B2	Q15466	257 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CHRNA6	Q15825	494 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRRT3	Q5FWE3	981 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KLHL17	Q6TDP4	642 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TMPRSS11A	Q6ZMR5	421 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ADAMTSL2	Q86TH1	951 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZSWIM9	Q86XI8	627 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZZZ3	Q8IYH5	903 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GPR135	Q8IZ08	494 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	WDR36	Q8NI36	951 aa	Known RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PIK3R3	Q92569	461 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TMEM203	Q969S6	136 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HRASLS5	Q96KN8	279 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IL4I1	Q96RQ9	567 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TRIB3	Q96RU7	358 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NXF2	Q9GZY0	626 aa	Known RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EPHX3	Q9H6B9	360 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SMURF1	Q9HCE7	757 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ABCB9	Q9NP78	766 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IMPAD1	Q9NX62	359 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RHCG	Q9UBD6	479 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MALT1	Q9UDY8	824 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TNPO3	Q9Y5L0	923 aa	Known RBP	5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR51B4	Q9Y5P0	310 aa		5.4	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IGHV1OR15-9	A0A0B4J2B8	117 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KIR2DS5	A0A0G2JLQ3	304 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A0A0G2JNG1	304 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		J3KTA2	159 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KIR2DS3	K7RE56	304 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TNFRSF11B	O00300	401 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CCNYL3	P0C7X3	344 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IL7	P13232	177 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GK	P32189	559 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DDOST	P39656	456 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CDH12	P55289	794 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RAB25	P57735	213 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KIR2DS5	Q14953	304 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LRRC73	Q5JTD7	316 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PTOV1	Q86YD1	416 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NXPE1	Q8N323	547 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NATD1	Q8N6N6	113 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FCGR1B	Q92637	280 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TRMT61A	Q96FX7	289 aa	Known RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAP6	Q96JE9	813 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	COL21A1	Q96P44	957 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LRFN3	Q9BTN0	628 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF717	Q9BY31	904 aa	Predicted RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GABARAPL1	Q9H0R8	117 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ARRDC1-AS1	Q9H2J1	176 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IMP3	Q9NV31	184 aa	Known RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SOHLH2	Q9NX45	425 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CCDC59	Q9P031	241 aa	Known RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CLEC2D	Q9UHP7	191 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CD84	Q9UIB8	345 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TEKT2	Q9UIF3	430 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		R4GN57	208 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A0A1W2PQ72	361 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	URAD	A6NGE7	173 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		B4DGG1	531 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	YY2	O15391	372 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LRRTM2	O43300	516 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	POP7	O75817	140 aa	Known RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SNX4	O95219	450 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C9	P02748	559 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CLEC2L	P0C7M8	214 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ACP5	P13686	325 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ATP1B2	P14415	290 aa	Predicted RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SDC1	P18827	310 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SRP54	P61011	504 aa	Known RBP	5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RPA4	Q13156	261 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SSX1	Q16384	188 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GPRC6A	Q5T6X5	926 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAHD1	Q6P587	224 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CRTC1	Q6UUV9	634 aa		5.39	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM131A	Q6UXB0	335 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms