RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SAXO2Q658L1 398 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 TMEM64Q6YI46 380 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 ZNF574Q6ZN55 896 aaPredicted RBP13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 ARHGAP22Q7Z5H3 698 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 SPPL2CQ8IUH8 684 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 OR5T3Q8NGG3 340 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 OR9A4Q8NGU2 314 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 SUN3Q8TAQ9 357 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 ADAMTS18Q8TE60 1221 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 ZCCHC14Q8WYQ9 949 aaKnown RBP13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 POP5Q969H6 163 aaKnown RBP13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 DPH2Q9BQC3 489 aaPredicted RBP13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 SPRTNQ9H040 489 aaPredicted RBP13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 EPS8L2Q9H6S3 715 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 ZNF780BQ9Y6R6 833 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 ACACAQ13085 2346 aa13.42□□□□□ -0.26
CYB561A3-216ENST00000540755 NBEAQ8NFP9 2946 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 A0A0A6YYC8 382 aaPredicted RBP13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 RNF103-CHMP3A0A140T963 221 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 BLACEA4D250 179 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 A8MU76 341 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 H0YIG0 161 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 H3BNX3 289 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 I3L1I5 382 aaPredicted RBP13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 GSTA4O15217 222 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 FLRT2O43155 660 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 OR2B3O76000 313 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 CAPNS1P04632 268 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 SPTBP11277 2137 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 NCK1P16333 377 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 MPIP34949 423 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 CHI3L1P36222 383 aaPredicted RBP13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 GCGRP47871 477 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 AVPR1BP47901 424 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 CDK9P50750 372 aaKnown RBP13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 POLE2P56282 527 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 GPR19Q15760 415 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 VMACQ2NL98 169 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 FAM214AQ32MH5 1076 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 CMPK2Q5EBM0 449 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 YOD1Q5VVQ6 348 aaPredicted RBP13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 TLDC1Q6P9B6 456 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 TMPRSS9Q7Z410 1059 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 GLRX5Q86SX6 157 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 CLEC4FQ8N1N0 589 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 OR4K14Q8NGD5 310 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 PNPT1Q8TCS8 783 aaKnown RBP13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 NEURL3Q96EH8 262 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 MVB12AQ96EY5 273 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 NSMCE2Q96MF7 247 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 FANCEQ9HB96 536 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 SEMA3GQ9NS98 782 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 GPATCH2Q9NW75 528 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 ACSL6Q9UKU0 697 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 SCN2AQ99250 2005 aa13.41□□□□□ -0.26
CYB561A3-216ENST00000540755 LAMA5O15230 3695 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 CXCR6O00574 342 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 NTN3O00634 580 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 CHST10O43529 356 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 NTRK1P04629 796 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 GPIP06744 558 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 GP1BAP07359 652 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 UMPSP11172 480 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 BMP2P12643 396 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 FOLR1P15328 257 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 SLC7A1P30825 629 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 GPC1P35052 558 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 ITGA1P56199 1179 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 ACY1Q03154 408 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 VEZF1Q14119 521 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 PTOV1Q86YD1 416 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 ZZZ3Q8IYH5 903 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 CCDC116Q8IYX3 515 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 OR5AK3PQ8NH89 298 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 OR1L3Q8NH93 324 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 SFXN5Q8TD22 340 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 ADAMTS14Q8WXS8 1223 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 TANKQ92844 425 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 MOAP1Q96BY2 351 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 ZNF501Q96CX3 271 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 CUTCQ9NTM9 273 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 TOR4AQ9NXH8 423 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 C6orf203Q9P0P8 240 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 SERTAD3Q9UJW9 196 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 CLCA2Q9UQC9 943 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 LRRC42Q9Y546 428 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 SNX8Q9Y5X2 465 aa13.4□□□□□ -0.26
CYB561A3-216ENST00000540755 IGHV5-10-1A0A0J9YXX1 117 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 TNFRSF21O75509 655 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 LDOC1O95751 146 aaPredicted RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 C8orf89P0DMQ9 161 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 RNH1P13489 461 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 CKMT2P17540 419 aa13.39□□□□□ -0.27
CYB561A3-216ENST00000540755 ACP1P24666 158 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms