RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 UBLCP1Q8WVY7 318 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-209ENST00000539197 ERO1AQ96HE7 468 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 SERINC2Q96SA4 455 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 INTS14Q96SY0 518 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 LSG1Q9H089 658 aaKnown RBP3.01□□□□□ -1.93
CCDC7-209ENST00000539197 TIGARQ9NQ88 270 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 FAM212BQ9NTI7 297 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-209ENST00000539197 POMT1Q9Y6A1 747 aa3.01□□□□□ -1.93
CCDC7-209ENST00000539197 IGHV3OR16-12A0A075B7B8 117 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 C5orf52A6NGY3 159 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 YDJCA8MPS7 323 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 CLN5O75503 358 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 OR6A2O95222 327 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 SBK2P0C263 348 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 LAMP1P11279 417 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 RPL27P61353 136 aaKnown RBP3□□□□□ -1.93
CCDC7-209ENST00000539197 LRRC63Q05C16 580 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 TFCP2Q12800 502 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 SLC10A1Q14973 349 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 EMC2Q15006 297 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 IQCCQ4KMZ1 466 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 LYPLAL1Q5VWZ2 237 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 ALKBH5Q6P6C2 394 aaKnown RBP3□□□□□ -1.93
CCDC7-209ENST00000539197 ZNF444Q8N0Y2 327 aaPredicted RBP3□□□□□ -1.93
CCDC7-209ENST00000539197 KIAA0895Q8NCT3 520 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 Q8NFD4 153 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 SEPT8Q92599 483 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 DNASE1L2Q92874 299 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 SNRNP40Q96DI7 357 aaKnown RBP3□□□□□ -1.93
CCDC7-209ENST00000539197 ERP27Q96DN0 273 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 STARD4Q96DR4 205 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 PIWIL1Q96J94 861 aaKnown RBP3□□□□□ -1.93
CCDC7-209ENST00000539197 ZNF665Q9H7R5 613 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 PRODH2Q9UF12 536 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 TMED7Q9Y3B3 224 aa3□□□□□ -1.93
CCDC7-209ENST00000539197 A8MX80 341 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 B4DXG7 233 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 CA11O75493 328 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 LETM1O95202 739 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-209ENST00000539197 CALML3P27482 149 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 RPA1P27694 616 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 TIA1P31483 386 aaKnown RBP eCLIP2.99□□□□□ -1.93
CCDC7-209ENST00000539197 EFNA3P52797 238 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 RIPPLY3P57055 190 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 TSPY1Q01534 308 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 ASAH1Q13510 395 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 QRICH1Q2TAL8 776 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 FAM219BQ5XKK7 198 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 CAVIN1Q6NZI2 390 aaKnown RBP2.99□□□□□ -1.93
CCDC7-209ENST00000539197 SHQ1Q6PI26 577 aaKnown RBP2.99□□□□□ -1.93
CCDC7-209ENST00000539197 TRAT1Q6PIZ9 186 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 Q8N9G6 341 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-209ENST00000539197 CKAP2Q8WWK9 683 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 FAM162AQ96A26 154 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 SGF29Q96ES7 293 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 C16orf58Q96GQ5 468 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 KIR2DL4Q99706 377 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 C17orf62Q9BQA9 187 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 ATG101Q9BSB4 218 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 IDI2Q9BXS1 227 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 TERF2IPQ9NYB0 399 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 TAS2R16Q9NYV7 291 aa2.99□□□□□ -1.93
CCDC7-209ENST00000539197 PFASO15067 1338 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 ANKDD1BA6NHY2 528 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 SLC15A5A6NIM6 579 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 CTDSPLO15194 276 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 EMC8O43402 210 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 TIMM44O43615 452 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 DFNA5O60443 496 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 SELENOFO60613 162 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 RAD51DO75771 328 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 SIX3O95343 332 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-209ENST00000539197 HSPB1P04792 205 aaKnown RBP2.98□□□□□ -1.93
CCDC7-209ENST00000539197 ZFYP08048 801 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-209ENST00000539197 IL2RGP31785 369 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 IER3P46695 156 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 ARHGDIAP52565 204 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 AKAP17AQ02040 695 aaKnown RBP2.98□□□□□ -1.93
CCDC7-209ENST00000539197 SLC3A1Q07837 685 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 CD47Q08722 323 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 AGBL2Q5U5Z8 902 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 PM20D1Q6GTS8 502 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 SCARA5Q6ZMJ2 495 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 H1FOOQ8IZA3 346 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-209ENST00000539197 TCP11Q8WWU5 503 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 SPATA17Q96L03 361 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 EDEM3Q9BZQ6 932 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 ETV7Q9Y603 341 aa2.98□□□□□ -1.93
CCDC7-209ENST00000539197 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 M0R296 226 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 IFIT3O14879 490 aaKnown RBP2.97□□□□□ -1.93
CCDC7-209ENST00000539197 SNRPCP09234 159 aaKnown RBP2.97□□□□□ -1.93
CCDC7-209ENST00000539197 CCND3P30281 292 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-209ENST00000539197 TLE4Q04727 773 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 PTK6Q13882 451 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 SIX6OS1Q8N1H7 587 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 CITED2Q99967 270 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-209ENST00000539197 NMUR2Q9GZQ4 415 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 GPR173Q9NS66 373 aa2.97□□□□□ -1.93
CCDC7-209ENST00000539197 EIF3KQ9UBQ5 218 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms