RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 DNAJB13P59910 316 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 ERVK-8P63133 956 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 ZNF267Q14586 743 aaPredicted RBP19.1■□□□□ 0.65
VPS28-206ENST00000526734 SPIN4Q56A73 249 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 PIGGQ5H8A4 983 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 C1QL3Q5VWW1 255 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 SLC48A1Q6P1K1 146 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 IL20RBQ6UXL0 311 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 Q6ZPB1 254 aaPredicted RBP19.1■□□□□ 0.65
VPS28-206ENST00000526734 RGS9BPQ6ZS82 235 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 MDGA2Q7Z553 956 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 GALNT12Q8IXK2 581 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 C9orf40Q8IXQ3 194 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 EPS8L3Q8TE67 593 aaKnown RBP19.1■□□□□ 0.65
VPS28-206ENST00000526734 GSTO2Q9H4Y5 243 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 MCM8Q9UJA3 840 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 ERVK-19Q9WJR5 959 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 ZNF835Q9Y2P0 537 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 SVILO95425 2214 aa19.1■□□□□ 0.65
VPS28-206ENST00000526734 SMIM23A6NLE4 172 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 G3V2L1 256 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 PGRMC2O15173 223 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 ZNF500O60304 480 aaPredicted RBP19.09■□□□□ 0.65
VPS28-206ENST00000526734 GSTM5P46439 218 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 SLC37A1P57057 533 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 EMBQ6PCB8 327 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 C16orf47Q6ZP98 133 aaPredicted RBP19.09■□□□□ 0.65
VPS28-206ENST00000526734 DGAT2L6Q6ZPD8 337 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 GK5Q6ZS86 529 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 FJX1Q86VR8 437 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 C1orf52Q8N6N3 182 aaKnown RBP19.09■□□□□ 0.65
VPS28-206ENST00000526734 CCNYL1Q8N7R7 359 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 AGAP11Q8TF27 550 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 SHCBP1LQ9BZQ2 653 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 LIN28AQ9H9Z2 209 aaKnown RBP19.09■□□□□ 0.65
VPS28-206ENST00000526734 CXorf21Q9HAI6 301 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 MKS1Q9NXB0 559 aa19.09■□□□□ 0.65
VPS28-206ENST00000526734 ACOT7O00154 380 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 SLU7O95391 586 aaKnown RBP19.08■□□□□ 0.64
VPS28-206ENST00000526734 CPMP14384 443 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 PORP16435 677 aaPredicted RBP19.08■□□□□ 0.64
VPS28-206ENST00000526734 KRT4P19013 534 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 DEKP35659 375 aaKnown RBP19.08■□□□□ 0.64
VPS28-206ENST00000526734 XKP51811 444 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 VSNL1P62760 191 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 ASPHQ12797 758 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 CFAP157Q5JU67 520 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 WDR93Q6P2C0 686 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 RPTNQ6XPR3 784 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 FRMD7Q6ZUT3 714 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 SPPL2CQ8IUH8 684 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 EID3Q8N140 333 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 OR7G1Q8NGA0 311 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 CHTF18Q8WVB6 975 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 FAM173AQ9BQD7 235 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 SACM1LQ9NTJ5 587 aa19.08■□□□□ 0.64
VPS28-206ENST00000526734 ZGRF1Q86YA3 2104 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 CPA3P15088 417 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 CNR1P21554 472 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 SLC18A2Q05940 514 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 ACSM2AQ08AH3 577 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 FUT7Q11130 342 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 EBPQ15125 230 aaKnown RBP19.07■□□□□ 0.64
VPS28-206ENST00000526734 ACSM2BQ68CK6 577 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 SAMD14Q8IZD0 417 aaPredicted RBP19.07■□□□□ 0.64
VPS28-206ENST00000526734 TAGAPQ8N103 731 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 CCDC63Q8NA47 563 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 TP53INP1Q96A56 240 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 TM4SF18Q96CE8 201 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 HBEGFQ99075 208 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 ACPTQ9BZG2 426 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 ROPN1BQ9BZX4 212 aaPredicted RBP19.07■□□□□ 0.64
VPS28-206ENST00000526734 WWTR1Q9GZV5 400 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 IQCGQ9H095 443 aaKnown RBP19.07■□□□□ 0.64
VPS28-206ENST00000526734 TSPAN10Q9H1Z9 355 aaPredicted RBP19.07■□□□□ 0.64
VPS28-206ENST00000526734 ROPN1Q9HAT0 212 aaPredicted RBP19.07■□□□□ 0.64
VPS28-206ENST00000526734 MID1IP1Q9NPA3 183 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 SIRT5Q9NXA8 310 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 CES1P1Q9UKY3 287 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 COL12A1Q99715 3063 aa19.07■□□□□ 0.64
VPS28-206ENST00000526734 A1L4Q6 167 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 WASHC1A8K0Z3 465 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 HRKO00198 91 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 CCL21O00585 134 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 P04436 131 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 ATP1B1P05026 303 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 DRD2P14416 443 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 ABOP16442 354 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 CSNK2A2P19784 350 aaPredicted RBP19.06■□□□□ 0.64
VPS28-206ENST00000526734 SERPINB3P29508 390 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 NAGLUP54802 743 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 IFFO1Q0D2I5 559 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 ZNF791Q3KP31 576 aaPredicted RBP19.06■□□□□ 0.64
VPS28-206ENST00000526734 RNFT1Q5M7Z0 435 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 TCHHL1Q5QJ38 904 aaPredicted RBP19.06■□□□□ 0.64
VPS28-206ENST00000526734 HLA-DQA1Q5Y7H0 255 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 GALNT18Q6P9A2 607 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 PAOXQ6QHF9 649 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 C17orf47Q8NEP4 570 aa19.06■□□□□ 0.64
VPS28-206ENST00000526734 OR2M7Q8NG81 312 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms