RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CLPPQ16740 277 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-211ENST00000525970 KIAA1644Q3SXP7 199 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ACCSLQ4AC99 568 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ATAD3BQ5T9A4 648 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 NIPAL3Q6P499 406 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 LRRC8BQ6P9F7 803 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 Q6ZVQ6 151 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ERASQ7Z444 233 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 SMIM29Q86T20 159 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ZDHHC21Q8IVQ6 265 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 SLC22A15Q8IZD6 547 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 STEAP2Q8NFT2 490 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 OR10G8Q8NGN5 311 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 TM9SF4Q92544 642 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 SLC25A36Q96CQ1 311 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 GIMAP5Q96F15 307 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 WBP1Q96G27 269 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 MAGED4Q96JG8 741 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 C4orf36Q96KX1 117 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 NODALQ96S42 347 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 NKX3-1Q99801 234 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-211ENST00000525970 PAPOLGQ9BWT3 736 aaKnown RBP3.93□□□□□ -1.78
CSDE1-211ENST00000525970 RBM24Q9BX46 236 aaKnown RBP3.93□□□□□ -1.78
CSDE1-211ENST00000525970 NACA2Q9H009 215 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 TMEM117Q9H0C3 514 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 WDR76Q9H967 626 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ZNF71Q9NQZ8 489 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-211ENST00000525970 SMPD3Q9NY59 655 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ERVK-18Q9QC07 812 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 BCAP29Q9UHQ4 241 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ERRFI1Q9UJM3 462 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-211ENST00000525970 B9D1Q9UPM9 204 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 ASB3Q9Y575 518 aa3.93□□□□□ -1.78
CSDE1-211ENST00000525970 hCG_38984A0A1B0GV85 526 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 ZSCAN5CA6NGD5 496 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 SLC1A7O00341 560 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 XPO1O14980 1071 aaKnown RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 BUB1O43683 1085 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 GMFGO60234 142 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 CIDEAO60543 219 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 STK17BO94768 372 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 MFN2O95140 757 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 CHRNA1P02708 482 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 CA3P07451 260 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 CLUP10909 449 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 TNNI3P19429 210 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 PAICSP22234 425 aaKnown RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 PBLDP30039 288 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 TRIM23P36406 574 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 PTGFRP43088 359 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 LEPRP48357 1165 aaKnown RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 ACADVLP49748 655 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 IL24Q13007 206 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 EFTUD2Q15029 972 aaKnown RBP eCLIP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 ZNF699Q32M78 642 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 STPG1Q5TH74 334 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 CBLN3Q6UW01 205 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 LHFPL4Q7Z7J7 247 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 ZCCHC7Q8N3Z6 543 aaKnown RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 DCLK2Q8N568 766 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 STPG4Q8N801 248 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 OR5AP2Q8NGF4 316 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 ZNF274Q96GC6 653 aaPredicted RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 CAPNS2Q96L46 248 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 CASD1Q96PB1 797 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 GDF3Q9NR23 364 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 FARSBQ9NSD9 589 aaKnown RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 ZNF175Q9Y473 711 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 SELENOKQ9Y6D0 94 aa3.92□□□□□ -1.78
CSDE1-211ENST00000525970 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.92□□□□□ -1.78
CSDE1-211ENST00000525970 SF3B1O75533 1304 aaKnown RBP eCLIP3.92□□□□□ -1.781e-6■■■■■ 28.6
CSDE1-211ENST00000525970 SDHDO14521 159 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 SIGLEC5O15389 551 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 MAGEB3O15480 346 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 LINC01565O15544 149 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 AP2A2O94973 939 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 FCER2P06734 321 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 C4BPBP20851 252 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 PAX7P23759 505 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 TMOD1P28289 359 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 NDST1P52848 882 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 KLF5Q13887 457 aaPredicted RBP3.91□□□□□ -1.78
CSDE1-211ENST00000525970 TEAD2Q15562 447 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 C1orf189Q5VU69 101 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 C19orf48Q6RUI8 117 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 GOLGA7Q7Z5G4 137 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 ZNF329Q86UD4 541 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 CBWD2Q8IUF1 395 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 OR4N5Q8IXE1 308 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 COG3Q96JB2 828 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 NLNQ9BYT8 704 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 LRRCC1Q9C099 1032 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 AGPAT5Q9NUQ2 364 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 MED17Q9NVC6 651 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 COX16Q9P0S2 106 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 MRPS7Q9Y2R9 242 aaKnown RBP3.91□□□□□ -1.78
CSDE1-211ENST00000525970 WIPI2Q9Y4P8 454 aa3.91□□□□□ -1.78
CSDE1-211ENST00000525970 DDX49Q9Y6V7 483 aaKnown RBP3.91□□□□□ -1.78
CSDE1-211ENST00000525970 WDR81Q562E7 1941 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms