RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 LIN28AQ9H9Z2 209 aaKnown RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 C19orf25Q9UFG5 118 aaPredicted RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 ATP6V1HQ9UI12 483 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 ZNF223Q9UK11 482 aaPredicted RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 ADAM21Q9UKJ8 722 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 ENTPD4Q9Y227 616 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 POLHQ9Y253 713 aa10.58□□□□□ -0.72
HTT-213ENST00000513806 COPG1Q9Y678 874 aaKnown RBP10.58□□□□□ -0.72
HTT-213ENST00000513806 SAGE2PA6NJ88 616 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 MYO1GB0I1T2 1018 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 PDPK1O15530 556 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 MAN1A2O60476 641 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 DDAH2O95865 285 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 PORP16435 677 aaPredicted RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 PCSK2P16519 638 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 GPX3P22352 226 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 SSTR4P31391 388 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 CDK9P50750 372 aaKnown RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 CCL11P51671 97 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 NCBP2P52298 156 aaKnown RBP eCLIP10.57□□□□□ -0.72
HTT-213ENST00000513806 SLC26A5P58743 744 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 PHC1P78364 1004 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 MGAT2Q10469 447 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 HSPB3Q12988 150 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 DUSP8Q13202 625 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 UBAP2LQ14157 1087 aaKnown RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 ZNF267Q14586 743 aaPredicted RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 EXOSC7Q15024 291 aaKnown RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 RPS6KA2Q15349 733 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 TBR1Q16650 682 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 SMU1Q2TAY7 513 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 BTBD16Q32M84 506 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 SPANXN4Q5MJ08 99 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 DCAF10Q5QP82 559 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 CPTPQ5TA50 214 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 C16orf47Q6ZP98 133 aaPredicted RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 IKBIPQ70UQ0 350 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 NDUFAF7Q7L592 441 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 ANKRD46Q86W74 232 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 CLECL1Q8IZS7 167 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 CLEC4FQ8N1N0 589 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 SIRT6Q8N6T7 355 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 NFAM1Q8NET5 270 aaPredicted RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 SLC2A12Q8TD20 617 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 THAP3Q8WTV1 239 aaPredicted RBP10.57□□□□□ -0.72
HTT-213ENST00000513806 MAGED4Q96JG8 741 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 IMMP1LQ96LU5 166 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 NUDT9Q9BW91 350 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 OR8D2Q9GZM6 311 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 ING2Q9H160 280 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 GLIPR2Q9H4G4 154 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 PRORYQ9H606 182 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 ADAP2Q9NPF8 381 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 KLHL14Q9P2G3 628 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 ERVK-19Q9WJR5 959 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 KCNMB2Q9Y691 235 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 ZNF780BQ9Y6R6 833 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 ATMQ13315 3056 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 EXPH5Q8NEV8 1989 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 NBEAQ8NFP9 2946 aa10.57□□□□□ -0.72
HTT-213ENST00000513806 BLACEA4D250 179 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 HPP00738 406 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 C1QCP02747 245 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 CLPSP04118 112 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 ABCB1P08183 1280 aaPredicted RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 SLC35E2P0CK97 266 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 CSNK2A2P19784 350 aaPredicted RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 PRPS1L1P21108 318 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 WNT3P56703 355 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 SERTAD2Q14140 314 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 ELAVL1Q15717 326 aaKnown RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 PRICKLE4Q2TBC4 344 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 FAM174BQ3ZCQ3 159 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 PDCD4Q53EL6 469 aaKnown RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 TRMT12Q53H54 448 aaKnown RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 B3GNTL1Q67FW5 361 aaPredicted RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 TMEM107Q6UX40 140 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 GK5Q6ZS86 529 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 SPATA21Q7Z572 469 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 CPLX4Q7Z7G2 160 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 HOMEZQ8IX15 550 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 ST13P4Q8IZP2 240 aaPredicted RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 MIER2Q8N344 545 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 LRRC25Q8N386 305 aaPredicted RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 ZNF721Q8TF20 911 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 RIT1Q92963 219 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 RBM18Q96H35 190 aaKnown RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 THOC3Q96J01 351 aaKnown RBP10.56□□□□□ -0.72
HTT-213ENST00000513806 AMDHD1Q96NU7 426 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 LPAR4Q99677 370 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 ZNF385DQ9H6B1 395 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 CLMPQ9H6B4 373 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 MAT2BQ9NZL9 334 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 CLCA3PQ9Y6N3 262 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 CACNA1GO43497 2377 aa10.56□□□□□ -0.72
HTT-213ENST00000513806 CACNA1BQ00975 2339 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 TRBV11-1A0A0K0K1C0 115 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 A8MUI8 341 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 K7EM74 188 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms