RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SLC22A16Q86VW1 577 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 C17orf64Q86WR6 236 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 ERC1Q8IUD2 1116 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 METTL4Q8N3J2 472 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 HDDC3Q8N4P3 179 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 Q8NBF4 154 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 ZNRF1Q8ND25 227 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 CHDHQ8NE62 594 aaPredicted RBP2.6□□□□□ -1.99
CHD1-207ENST00000511628 OR10G7Q8NGN6 311 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.6□□□□□ -1.99
CHD1-207ENST00000511628 GTF3AQ92664 365 aaKnown RBP2.6□□□□□ -1.99
CHD1-207ENST00000511628 PNPLA2Q96AD5 504 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 NABP1Q96AH0 204 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 COG3Q96JB2 828 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 RPGRIP1Q96KN7 1286 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 SAMD8Q96LT4 415 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 PRICKLE1Q96MT3 831 aaPredicted RBP2.6□□□□□ -1.99
CHD1-207ENST00000511628 AGAP4Q96P64 663 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 FAM111AQ96PZ2 611 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 COQ7Q99807 217 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 SPAG8Q99932 426 aaPredicted RBP2.6□□□□□ -1.99
CHD1-207ENST00000511628 TRIM6Q9C030 488 aaPredicted RBP2.6□□□□□ -1.99
CHD1-207ENST00000511628 KRT23Q9C075 422 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 TRPV6Q9H1D0 765 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 C1orf21Q9H246 121 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 PARLQ9H300 379 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 KCNK13Q9HB14 408 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 SLC25A19Q9HC21 320 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 GDF3Q9NR23 364 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 FAM120CQ9NX05 1096 aaKnown RBP2.6□□□□□ -1.99
CHD1-207ENST00000511628 SOHLH2Q9NX45 425 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 TEKT2Q9UIF3 430 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 RARRES3Q9UL19 164 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 TP53TG3Q9ULZ0 132 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 CSAG2Q9Y5P2 127 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 CLCA3PQ9Y6N3 262 aa2.6□□□□□ -1.99
CHD1-207ENST00000511628 RAD54L2Q9Y4B4 1467 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 LOC105371242A0A075B767 164 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 LOC390937A0A1W2PQ73 354 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 YJEFN3A6XGL0 299 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 K7EQG2 157 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 SOCS3O14543 225 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 CCSO14618 274 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 INPP4BO15327 924 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 KIAA0513O60268 411 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 MTRF1O75570 445 aaKnown RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 OR6B1O95007 311 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 SYNGR4O95473 234 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 MT-ATP6P00846 226 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 IGHG3P01860 377 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 FUT1P19526 365 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 GATA2P23769 480 aaPredicted RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 CAPGP40121 348 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 RPS4XP62701 263 aaKnown RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 CCZ1BP86790 482 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 CCZ1P86791 482 aaPredicted RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 COX10Q12887 443 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 NFATC2Q13469 925 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 LY6DQ14210 128 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 GAMTQ14353 236 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 GCKRQ14397 625 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 CEBPEQ15744 281 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 ZKSCAN8Q15776 578 aaPredicted RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 UPP1Q16831 310 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 LIPKQ5VXJ0 399 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 RTL6Q6ICC9 239 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 TMEM26Q6ZUK4 368 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 TAF8Q7Z7C8 310 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 CARM1Q86X55 608 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 KDM8Q8N371 416 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 CNNM3Q8NE01 707 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 PRSS33Q8NF86 280 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 OR4F5Q8NH21 305 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 SLC45A3Q96JT2 553 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 NSMCE2Q96MF7 247 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 ALKBH3Q96Q83 286 aaPredicted RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 TNFRSF13CQ96RJ3 184 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 UBE2TQ9NPD8 197 aaPredicted RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 CNOT2Q9NZN8 540 aaKnown RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 CLIP2Q9UDT6 1046 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 IL20RAQ9UHF4 553 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 ZNF346Q9UL40 294 aaKnown RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 CCPG1Q9ULG6 757 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.59□□□□□ -1.99
CHD1-207ENST00000511628 PLEKHA6Q9Y2H5 1048 aa2.59□□□□□ -1.99
CHD1-207ENST00000511628 MRPS2Q9Y399 296 aaKnown RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 KLF2Q9Y5W3 355 aaPredicted RBP2.59□□□□□ -1.99
CHD1-207ENST00000511628 ZMYM6O95789 1325 aa2.59□□□□□ -2
CHD1-207ENST00000511628 FGD5Q6ZNL6 1462 aa2.58□□□□□ -2
CHD1-207ENST00000511628 FER1L5A0AVI2 2057 aa2.58□□□□□ -2
CHD1-207ENST00000511628 ARHGAP42A6NI28 874 aa2.58□□□□□ -2
CHD1-207ENST00000511628 EPM2AB3EWF7 344 aa2.58□□□□□ -2
CHD1-207ENST00000511628 SH2D1BO14796 132 aa2.58□□□□□ -2
CHD1-207ENST00000511628 TFECO14948 347 aaPredicted RBP2.58□□□□□ -2
CHD1-207ENST00000511628 NME2P1O60361 137 aa2.58□□□□□ -2
CHD1-207ENST00000511628 IGHV3-13P01766 116 aa2.58□□□□□ -2
CHD1-207ENST00000511628 PROS1P07225 676 aa2.58□□□□□ -2
CHD1-207ENST00000511628 SERPINF2P08697 491 aa2.58□□□□□ -2
CHD1-207ENST00000511628 CCDC192P0DO97 292 aa2.58□□□□□ -2
CHD1-207ENST00000511628 GNSP15586 552 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms