RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MMP21Q8N119 569 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 ZFP62Q8NB50 900 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 OR2M7Q8NG81 312 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 OR8K3Q8NH51 312 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 AGAP11Q8TF27 550 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 RIT1Q92963 219 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 ART5Q96L15 291 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 PSD3Q9NYI0 1048 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 ZNF225Q9UK10 706 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 SNX6Q9UNH7 406 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 CACNA1DQ01668 2161 aa13.7□□□□□ -0.22
UBE2D3-228ENST00000508974 NCOA6Q14686 2063 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 A0A1W2PPM1 405 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 SHBGP04278 402 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 TPOP07202 933 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 SSTR4P31391 388 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 MAPK12P53778 367 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 NDUFAF5Q5TEU4 345 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 MTFR2Q6P444 385 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 OPN5Q6U736 354 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 Q6ZPB1 254 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC29A4Q7RTT9 530 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 PAGE2Q7Z2X7 111 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 CD163Q86VB7 1156 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 DOLPP1Q86YN1 238 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 METTL4Q8N3J2 472 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 FAM13CQ8NE31 585 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 OR5M3Q8NGP4 307 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 C16orf52Q8NHV5 167 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC22A8Q8TCC7 542 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 PELOQ9BRX2 385 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 C1QTNF3Q9BXJ4 246 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 TTTY12Q9BZ98 90 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 AHSPQ9NZD4 102 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 TRPS1Q9UHF7 1281 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 PPT2Q9UMR5 302 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 MEMO1Q9Y316 297 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 PCNX1Q96RV3 2341 aa13.69□□□□□ -0.22
UBE2D3-228ENST00000508974 ITPR2Q14571 2701 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 ACOT7O00154 380 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 MANBAO00462 879 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 PRRG2O14669 202 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 NADKO95544 446 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 P04436 131 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 CT62P0C5K7 136 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC35E2P0CK97 266 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 ATP5F1P24539 256 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 HMOX2P30519 316 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 PTGS2P35354 604 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 PIGAP37287 484 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 ALDH9A1P49189 494 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 SLC37A1P57057 533 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 GALNT1Q10472 559 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 BIKQ13323 160 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 SPRED3Q2MJR0 410 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 PIGGQ5H8A4 983 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 PRAMEF20Q5VT98 475 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 SP5Q6BEB4 398 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 FAM180BQ6P0A1 224 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 TMEM64Q6YI46 380 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 GPRIN3Q6ZVF9 776 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 ZNF808Q8N4W9 903 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 C1orf52Q8N6N3 182 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 C7orf57Q8NEG2 295 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 NUBPLQ8TB37 319 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 MZB1Q8WU39 189 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 KCNA7Q96RP8 456 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 WWTR1Q9GZV5 400 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 SACM1LQ9NTJ5 587 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 EXPH5Q8NEV8 1989 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 ZNF407Q9C0G0 2248 aa13.68□□□□□ -0.22
UBE2D3-228ENST00000508974 ERAL1O75616 437 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 CLPSP04118 112 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 CHN1P15882 459 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 IMPDH1P20839 514 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 CNR1P21554 472 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 NT5EP21589 574 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 MAGEA5P43359 124 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 HTR6P50406 440 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 XKP51811 444 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 TBL3Q12788 808 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 EBPQ15125 230 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 RASA2Q15283 850 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 CDSNQ15517 529 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 MPEG1Q2M385 716 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 C6orf163Q5TEZ5 329 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 SCIMPQ6UWF3 145 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 RPTNQ6XPR3 784 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 GK5Q6ZS86 529 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 GALNT12Q8IXK2 581 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 CCNYL1Q8N7R7 359 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 GOLM1Q8NBJ4 401 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 OR4K14Q8NGD5 310 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 FAM57AQ8TBR7 257 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 METTL6Q8TCB7 284 aa13.67□□□□□ -0.22
UBE2D3-228ENST00000508974 FAM173AQ9BQD7 235 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms