RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 GPR180Q86V85 440 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 EID3Q8N140 333 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 LRRC25Q8N386 305 aaPredicted RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 TEX9Q8N6V9 391 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 PPM1NQ8N819 430 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 ZNF441Q8N8Z8 693 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 SRFBP1Q8NEF9 429 aaKnown RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 OR10G3Q8NGC4 313 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 OR5L2Q8NGL0 311 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 OR5M3Q8NGP4 307 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 NUBPLQ8TB37 319 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 STAG3L4Q8TBR4 150 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 FBXO25Q8TCJ0 367 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 FBF1Q8TES7 1133 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 PAQR8Q8TEZ7 354 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 CHTF18Q8WVB6 975 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 KCTD4Q8WVF5 259 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 RGMAQ96B86 450 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 CMTM7Q96FZ5 175 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 MTERF1Q99551 399 aaKnown RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 ROGDIQ9GZN7 287 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 LIME1Q9H400 295 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 RPF2Q9H7B2 306 aaKnown RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 ZNF703Q9H7S9 590 aaPredicted RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 DDX31Q9H8H2 851 aaKnown RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 DMRT3Q9NQL9 472 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 SACM1LQ9NTJ5 587 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 NUDT4Q9NZJ9 180 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 OPTCQ9UBM4 332 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 RNF14Q9UBS8 474 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 CNOT11Q9UKZ1 510 aaKnown RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 RNF11Q9Y3C5 154 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 TSC22D4Q9Y3Q8 395 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 L3MBTL1Q9Y468 752 aa5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 NSD1Q96L73 2696 aaPredicted RBP5.92□□□□□ -1.46
HMGN1P16-201ENST00000508308 A0A0A6YYD5 115 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 A0A1B0GTL3 188 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 FAM221AA4D161 298 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SYNDIG1LA6NDD5 238 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SUPT3HB4E1H0 165 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 H0YIV9 168 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ACOT7O00154 380 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 OR7A17O14581 309 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 PGRMC2O15173 223 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 HCN1O60741 890 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 TRIM3O75382 744 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SUPT3HO75486 399 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 CTAG2O75638 210 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SIX3O95343 332 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 GPR75O95800 540 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 GBAP04062 536 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ALDOAP04075 364 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 P04436 131 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 C2P06681 752 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 GSTA2P09210 222 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 LTA4HP09960 611 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 CT62P0C5K7 136 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ALOX15P16050 662 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 EPB42P16452 691 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 S1PR1P21453 382 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 CRABP2P29373 138 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 DNAJA1P31689 397 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 PIK3CBP42338 1070 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 PAFAH1B1P43034 410 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 MAGEA4P43358 317 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 MAN2A2P49641 1150 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 NEK2P51955 445 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 PLTPP55058 493 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 WNT3P56703 355 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SLC37A1P57057 533 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 RPS13P62277 151 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 HERVK_113P63132 956 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ERVK-8P63133 956 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 C2orf54Q08AI8 447 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ILF2Q12905 390 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 DDX39BQ13838 428 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ZNF267Q14586 743 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SLC10A1Q14973 349 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SLMAPQ14BN4 828 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SETDB1Q15047 1291 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 EBPQ15125 230 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 PCBP2Q15366 365 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 HIST2H2ACQ16777 129 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SPRED3Q2MJR0 410 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 SLC22A10Q63ZE4 541 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 BICRALQ6AI39 1079 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 HIST2H2AA3Q6FI13 130 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 PAOXQ6QHF9 649 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 CTAGE3PQ8IX95 158 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ULK2Q8IYT8 1036 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ST13P4Q8IZP2 240 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 PLD6Q8N2A8 252 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 FBXW8Q8N3Y1 598 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 ZCCHC7Q8N3Z6 543 aaKnown RBP5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 L3MBTL4Q8NA19 623 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 NAXEQ8NCW5 288 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 RHEBL1Q8TAI7 183 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 WDR20Q8TBZ3 569 aa5.91□□□□□ -1.46
HMGN1P16-201ENST00000508308 CDKL2Q92772 493 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms