RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ZNF551Q7Z340 670 aaPredicted RBP9.55□□□□□ -0.88
DDX41-203ENST00000504781 C6orf120Q7Z4R8 191 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 C11orf65Q8NCR3 313 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 HIPK4Q8NE63 616 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 OR9A4Q8NGU2 314 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 ZNF501Q96CX3 271 aaPredicted RBP9.55□□□□□ -0.88
DDX41-203ENST00000504781 ELP4Q96EB1 424 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 AURKBQ96GD4 344 aaPredicted RBP9.55□□□□□ -0.88
DDX41-203ENST00000504781 RSRC1Q96IZ7 334 aaKnown RBP9.55□□□□□ -0.88
DDX41-203ENST00000504781 NDC1Q9BTX1 674 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 TRIM8Q9BZR9 551 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 CHST8Q9H2A9 424 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 PIF1Q9H611 641 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 CXorf36Q9H7Y0 433 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 SLAMF7Q9NQ25 335 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 FGF21Q9NSA1 209 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 SIRT3Q9NTG7 399 aaPredicted RBP9.55□□□□□ -0.88
DDX41-203ENST00000504781 DCAF13Q9NV06 445 aaKnown RBP9.55□□□□□ -0.88
DDX41-203ENST00000504781 OLAHQ9NV23 265 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 GPATCH2Q9NW75 528 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 NKX1-2Q9UD57 310 aaPredicted RBP9.55□□□□□ -0.88
DDX41-203ENST00000504781 KLHL3Q9UH77 587 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 CLCA2Q9UQC9 943 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 SNX8Q9Y5X2 465 aa9.55□□□□□ -0.88
DDX41-203ENST00000504781 A0A087WV62 115 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 A0A0A6YYC8 382 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 IGHV5-10-1A0A0J9YXX1 117 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 SPAARA0A1B0GVQ0 90 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 TCRBV5S2A0A599 114 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 SYNDIG1LA6NDD5 238 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 GLOD5A6NK44 160 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 DUXAA6NLW8 204 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 TMEM150CB9EJG8 249 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 H3BNX3 289 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 I3L1I5 382 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 SGK494L7N484 410 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 TNFRSF21O75509 655 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 IFNA14P01570 189 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 ATP1B1P05026 303 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 HBQ1P09105 142 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 SLC35E2P0CK97 266 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 EFNA1P20827 205 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 PSMA4P25789 261 aaKnown RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 KDELR2P33947 212 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 GALNSP34059 522 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 FEN1P39748 380 aaKnown RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 CRATP43155 626 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 MAPK10P53779 464 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 HSD17B7P56937 341 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 PRR5P85299 388 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 SHC2P98077 582 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 E2F1Q01094 437 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 ZFP36L1Q07352 338 aaKnown RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 IL11RAQ14626 422 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 CYP51A1Q16850 503 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 DEFB110Q30KQ9 67 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 FAM98BQ52LJ0 330 aaKnown RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 SNAP47Q5SQN1 464 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 INTS11Q5TA45 600 aaKnown RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 ZCCHC12Q6PEW1 402 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 CYP2R1Q6VVX0 501 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 DNAJC14Q6Y2X3 702 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 CCDC80Q76M96 950 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 PRSS41Q7RTY9 318 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 ZZZ3Q8IYH5 903 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 LRRC25Q8N386 305 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 DTWD1Q8N5C7 304 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 OR56A1Q8NGH5 318 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 SUN3Q8TAQ9 357 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 MIPOL1Q8TD10 442 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 CANT1Q8WVQ1 401 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 PYDC1Q8WXC3 89 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 MMABQ96EY8 250 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 CNDP2Q96KP4 475 aaKnown RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 OR1F2PQ96R84 312 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 GFM1Q96RP9 751 aaKnown RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 CDC6Q99741 560 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 NUDT22Q9BRQ3 303 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 ZMYND15Q9H091 742 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 YY1AP1Q9H869 796 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 CUTCQ9NTM9 273 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 IRAK4Q9NWZ3 460 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 TMEM9Q9P0T7 183 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 PTGFRNQ9P2B2 879 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 RPS6KA6Q9UK32 745 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 ATXN7L1Q9ULK2 861 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 FAF1Q9UNN5 650 aaPredicted RBP9.54□□□□□ -0.88
DDX41-203ENST00000504781 SRPK3Q9UPE1 567 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 RP1P56715 2156 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 LAMA1P25391 3075 aa9.54□□□□□ -0.88
DDX41-203ENST00000504781 CACNA1BQ00975 2339 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 DHRS12A0PJE2 317 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 FAM227AF5H4B4 570 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 H0Y3Z8 333 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 TMX2-CTNND1H3BSU7 103 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 DSCR3O14972 297 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 ZNF749O43361 778 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 PLOD3O60568 738 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 ONECUT2O95948 504 aa9.53□□□□□ -0.88
DDX41-203ENST00000504781 AGR2O95994 175 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms