RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 NCF2P19878 526 aaPredicted RBP12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 UCNP55089 124 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 PDE7AQ13946 482 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 SERTAD2Q14140 314 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 RPS6KA2Q15349 733 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 PAOXQ6QHF9 649 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 KIF2BQ8N4N8 673 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 NFAM1Q8NET5 270 aaPredicted RBP12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 OR9I1Q8NGQ6 314 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 SUN3Q8TAQ9 357 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 C10orf82Q8WW14 230 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 THAP4Q8WY91 577 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 IMMP1LQ96LU5 166 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 BBC3Q96PG8 261 aaPredicted RBP12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 BBS4Q96RK4 519 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 LPAR4Q99677 370 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 ANKRA2Q9H9E1 313 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 ADAP2Q9NPF8 381 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 EHD3Q9NZN3 535 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 KLHL14Q9P2G3 628 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 ADAM21Q9UKJ8 722 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 PSME2Q9UL46 239 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 ENTPD4Q9Y227 616 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 WBP11Q9Y2W2 641 aaKnown RBP12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 COPG1Q9Y678 874 aaKnown RBP12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 MED13Q9UHV7 2174 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 MAST4O15021 2626 aa12.39□□□□□ -0.43
PDLIM7-212ENST00000504380 SAGE2PA6NJ88 616 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 MYO1GB0I1T2 1018 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 PDPK1O15530 556 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 SLC35E2P0CK97 266 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 IDO1P14902 403 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 CSNK2A2P19784 350 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 PRPS1L1P21108 318 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 GPX3P22352 226 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 CCL11P51671 97 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 NCBP2P52298 156 aaKnown RBP eCLIP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 DGKQP52824 942 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 SLC26A5P58743 744 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 PLIN5Q00G26 463 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 RAPSNQ13702 412 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 ZNF267Q14586 743 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 ELAVL1Q15717 326 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 BTBD16Q32M84 506 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 PDCD4Q53EL6 469 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 CRTC2Q53ET0 693 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 DCAF10Q5QP82 559 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 CPTPQ5TA50 214 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 OR4F3Q6IEY1 312 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 ZNF551Q7Z340 670 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 SPATA21Q7Z572 469 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 CPLX4Q7Z7G2 160 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 ST13P4Q8IZP2 240 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 LRRC25Q8N386 305 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 SIMC1Q8NDZ2 872 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 OR9A2Q8NGT5 310 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 KAT2AQ92830 837 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 RIT1Q92963 219 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 BRINP2Q9C0B6 783 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 OR8D2Q9GZM6 311 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 ING2Q9H160 280 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 GLIPR2Q9H4G4 154 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 GIMAP4Q9NUV9 329 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 KCNMB2Q9Y691 235 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 CLCA3PQ9Y6N3 262 aa12.38□□□□□ -0.43
PDLIM7-212ENST00000504380 PTPRQQ9UMZ3 2332 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 A0A1W2PQ72 361 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 EIF4E1BA6NMX2 242 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 TBX19O60806 448 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 NME6O75414 186 aaPredicted RBP12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 DDAH2O95865 285 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 ITGAMP11215 1152 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 PCSK2P16519 638 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 SSTR4P31391 388 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 SOX18P35713 384 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 ST13P50502 369 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 PHC1P78364 1004 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 MRPS35P82673 323 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 MGAT2Q10469 447 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 TBR1Q16650 682 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 GSTA3Q16772 222 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 SPANXN4Q5MJ08 99 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 R3HCC1LQ7Z5L2 792 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 MIER2Q8N344 545 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 SLC2A12Q8TD20 617 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 EXTL1Q92935 676 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 NCLNQ969V3 563 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 NACC2Q96BF6 587 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 COQ8BQ96D53 544 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 MAGED4Q96JG8 741 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 FER1L6-AS2Q96M78 137 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 AMDHD1Q96NU7 426 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 IP6K3Q96PC2 410 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 SIKE1Q9BRV8 207 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 TUBB6Q9BUF5 446 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 NUDT9Q9BW91 350 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 PRORYQ9H606 182 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 CLMPQ9H6B4 373 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms