RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.41	□□□□□ -0.58
MATR3-231	ENST00000502394	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.41	□□□□□ -0.58
MATR3-231	ENST00000502394	NDOR1	Q9UHB4	597 aa		11.41	□□□□□ -0.58
MATR3-231	ENST00000502394	CLCA2	Q9UQC9	943 aa		11.41	□□□□□ -0.58
MATR3-231	ENST00000502394	ENTPD4	Q9Y227	616 aa		11.41	□□□□□ -0.58
MATR3-231	ENST00000502394	NUP214	P35658	2090 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	IGKV3D-11	A0A0A0MRZ8	115 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	PRORSD1P	A6NEY8	169 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	B4GALT2	O60909	372 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	CTNS	O60931	367 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	LDB3	O75112	727 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	CPNE3	O75131	537 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	JRK	O75564	520 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	BMP10	O95393	424 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	NTRK1	P04629	796 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	GSN	P06396	782 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	C8orf89	P0DMQ9	161 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	CPM	P14384	443 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	PPP2R1B	P30154	601 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	FEN1	P39748	380 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	GZMM	P51124	257 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	XK	P51811	444 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	MVD	P53602	400 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	MANF	P55145	182 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	HSD17B7	P56937	341 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	CORO7	P57737	925 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	EEFSEC	P57772	596 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	ERV3-1	Q14264	604 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	FXN	Q16595	210 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	SPATS1	Q496A3	300 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	ARHGAP40	Q5TG30	622 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	LYPD8	Q6UX82	237 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	CEACAM20	Q6UY09	585 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	TMEM64	Q6YI46	380 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	QSOX2	Q6ZRP7	698 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	CALHM3	Q86XJ0	350 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	OR4N5	Q8IXE1	308 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	ULK2	Q8IYT8	1036 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	C10orf111	Q8N326	155 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	LRRC25	Q8N386	305 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	ZFP28	Q8NHY6	868 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	AURKB	Q96GD4	344 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	BBS4	Q96RK4	519 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	ZPBP	Q9BS86	351 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	DDA1	Q9BW61	102 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	RBCK1	Q9BYM8	510 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	TRIM8	Q9BZR9	551 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	SLC26A1	Q9H2B4	701 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	PRTFDC1	Q9NRG1	225 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	GIMAP4	Q9NUV9	329 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	GPATCH2	Q9NW75	528 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	SLC39A1	Q9NY26	324 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	NTM	Q9P121	344 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	GMPR2	Q9P2T1	348 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	RAPGEFL1	Q9UHV5	662 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	VPS4A	Q9UN37	437 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	MRPS33	Q9Y291	106 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	MMACHC	Q9Y4U1	282 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	PCDHGA3	Q9Y5H0	932 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	B3GALT1	Q9Y5Z6	326 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	ZNF780B	Q9Y6R6	833 aa		11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.4	□□□□□ -0.58
MATR3-231	ENST00000502394	VSTM2B	A6NLU5	285 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	PLOD2	O00469	737 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	PLD2	O14939	933 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	CNOT3	O75175	753 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	SORBS2	O94875	1100 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	DLGAP3	O95886	979 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	RECK	O95980	971 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	ATP1B1	P05026	303 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	ABCB1	P08183	1280 aa	Predicted RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	SLC35E2	P0CK97	266 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	HSD17B1	P14061	328 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	POR	P16435	677 aa	Predicted RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	GPX2	P18283	190 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	UQCRC2	P22695	453 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	MPI	P34949	423 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	NCBP2	P52298	156 aa	Known RBP eCLIP	11.39	□□□□□ -0.59	6e-9	■■□□□ 12.6
MATR3-231	ENST00000502394	MTPN	P58546	118 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	BTG2	P78543	158 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	DCD	P81605	110 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	RHAG	Q02094	409 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	ID2	Q02363	134 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	ABHD18	Q0P651	414 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	MGAT2	Q10469	447 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	NKAIN1	Q4KMZ8	207 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	SAMD4B	Q5PRF9	694 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	NUP210L	Q5VU65	1888 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	SAXO2	Q658L1	398 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	LCN10	Q6JVE6	187 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	MRPL14	Q6P1L8	145 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	ZNF621	Q6ZSS3	439 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	CCDC116	Q8IYX3	515 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	FBXW8	Q8N3Y1	598 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	WDR36	Q8NI36	951 aa	Known RBP	11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	SFXN5	Q8TD22	340 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	ZNF675	Q8TD23	568 aa		11.39	□□□□□ -0.59
MATR3-231	ENST00000502394	COL26A1	Q96A83	441 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms