RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 OR10H2O60403 315 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 CNOT3O75175 753 aaKnown RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 JRKO75564 520 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 IFNA16P05015 189 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 LAMP1P11279 417 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 MAOAP21397 527 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 FRKP42685 505 aaPredicted RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 STT3AP46977 705 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 MNAT1P51948 309 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 HNRNPFP52597 415 aaKnown RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 MANFP55145 182 aaKnown RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 BTG2P78543 158 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 CYLC2Q14093 348 aaPredicted RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 UBAP2LQ14157 1087 aaKnown RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 ELAVL1Q15717 326 aaKnown RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 SPANXN4Q5MJ08 99 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 CPZQ66K79 652 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 TMEM205Q6UW68 189 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 UNQ6494/PRO21346Q6UXR6 183 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 PRSS58Q8IYP2 241 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 TMEM52Q8NDY8 209 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 KCNE4Q8WWG9 221 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 DAZLQ92904 295 aaKnown RBP11.65□□□□□ -0.54
SNX17-208ENST00000493711 SPDL1Q96EA4 605 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 RNF31Q96EP0 1072 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 ITCHQ96J02 903 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 TEX37Q96LM6 180 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 ZNF681Q96N22 645 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 OR52E6Q96RD3 313 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 CCDC106Q9BWC9 280 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 NEUROD4Q9HD90 331 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 ADAP2Q9NPF8 381 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 BTNL2Q9UIR0 455 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 NDUFAF1Q9Y375 327 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 LOC102723996A0A087X1L8 192 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 A0A1W2PQ72 361 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 NR5A2O00482 541 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 ANGPT2O15123 496 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 RRP8O43159 456 aaKnown RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 LDB3O75112 727 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 PRKRAO75569 313 aaKnown RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 SNRNP200O75643 2136 aaKnown RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 BCAS2O75934 225 aaPredicted RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 NPPAP01160 153 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 TNNI3P19429 210 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 IL12AP29459 219 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 TRPC1P48995 793 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 NCBP2P52298 156 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNX17-208ENST00000493711 OR4D2P58180 307 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 AP2B1P63010 937 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 GABPB1Q06547 395 aaPredicted RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 KRT72Q14CN4 511 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 MAPKAPK3Q16644 382 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 CRTC2Q53ET0 693 aaPredicted RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 OR4F3Q6IEY1 312 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 BHLHB9Q6PI77 547 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 ANKRD37Q7Z713 158 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 FUNDC1Q8IVP5 155 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 OR4N5Q8IXE1 308 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 MMP21Q8N119 569 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 TRIML2Q8N7C3 387 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 OR9I1Q8NGQ6 314 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 OR14A16Q8NHC5 309 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 ZNF675Q8TD23 568 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 MOAP1Q96BY2 351 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 CNRIP1Q96F85 164 aaPredicted RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 SLC45A3Q96JT2 553 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 CCDC115Q96NT0 180 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 AMDHD1Q96NU7 426 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 NECTIN3Q9NQS3 549 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNX17-208ENST00000493711 LEF1Q9UJU2 399 aaPredicted RBP11.64□□□□□ -0.55
SNX17-208ENST00000493711 CLCA3PQ9Y6N3 262 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 NBEAQ8NFP9 2946 aa11.64□□□□□ -0.55
SNX17-208ENST00000493711 TMEM8BA6NDV4 472 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 CAPN14A8MX76 684 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 PEX12O00623 359 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 CREG1O75629 220 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 UMODP07911 640 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 COX4I1P13073 169 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 FEN1P39748 380 aaKnown RBP11.63□□□□□ -0.55
SNX17-208ENST00000493711 ZFP36L2P47974 494 aaKnown RBP11.63□□□□□ -0.55
SNX17-208ENST00000493711 DGKQP52824 942 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 MAP4K2Q12851 820 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 CLN3Q13286 438 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 SPRED3Q2MJR0 410 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 VPS26BQ4G0F5 336 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 TIGD2Q4W5G0 525 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 ZNF385BQ569K4 471 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 ANKRD26P1Q6NSI1 321 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 RIPOR1Q6ZS17 1223 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 SHISA6Q6ZSJ9 500 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 TRPM8Q7Z2W7 1104 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 CPEB2Q7Z5Q1 589 aaKnown RBP11.63□□□□□ -0.55
SNX17-208ENST00000493711 TMEM151BQ8IW70 566 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 GALNT12Q8IXK2 581 aa11.63□□□□□ -0.55
SNX17-208ENST00000493711 CCDC116Q8IYX3 515 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms