RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ZNF225Q9UK10 706 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 PCTPQ9UKL6 214 aa8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CHCHD2Q9Y6H1 151 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-211ENST00000491581 CELSR1Q9NYQ6 3014 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 A0A088AWK7 358 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 TRIM49D1C9J1S8 452 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 OR10H2O60403 315 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 GPR75O95800 540 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 KLK1P06870 262 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 NR2F6P10588 404 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF10P21506 573 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 TCEA1P23193 301 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ELAVL4P26378 380 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 GSTM2P28161 218 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 MAGEA12P43365 314 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 HTR6P50406 440 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 AGFG1P52594 562 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ALDH18A1P54886 795 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 SLC37A1P57057 533 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 TGM3Q08188 693 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 SERTAD2Q14140 314 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ACAP2Q15057 778 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 PCBP2Q15366 365 aaKnown RBP eCLIP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 PRSS53Q2L4Q9 553 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 TMEM35AQ53FP2 167 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 FNDC7Q5VTL7 733 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 LETMD1Q6P1Q0 360 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 MTFR2Q6P444 385 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ARHGAP11AQ6P4F7 1023 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 SCIMPQ6UWF3 145 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 LSRQ86X29 649 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 POGLUT1Q8NBL1 392 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ACBD4Q8NC06 268 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 NAXEQ8NCW5 288 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ADCY4Q8NFM4 1077 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 OR10Q1Q8NGQ4 319 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 PHF10Q8WUB8 498 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 DCAKDQ8WVC6 231 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 RIT1Q92963 219 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 FBXL20Q96IG2 436 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 PAFAH2Q99487 392 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 FAM173AQ9BQD7 235 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 TTYH2Q9BSA4 534 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 PITHD1Q9GZP4 211 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 C12orf65Q9H3J6 166 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ACSS3Q9H6R3 686 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF703Q9H7S9 590 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 CHST11Q9NPF2 352 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 SACM1LQ9NTJ5 587 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 CNOT11Q9UKZ1 510 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 SLC6A5Q9Y345 797 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.19□□□□□ -1.1
HDAC3-211ENST00000491581 DNAJC13O75165 2243 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 PKDREJQ9NTG1 2253 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 NOTCH2Q04721 2471 aa8.19□□□□□ -1.1
HDAC3-211ENST00000491581 A8MT66 165 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 B4DXG7 233 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 H0YIV9 168 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 GOLGA8RI6L899 631 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 OR4F21O95013 312 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 CLDN9O95484 217 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 MLYCDO95822 493 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 PDYNP01213 254 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 P04436 131 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 FAM153BP0C7A2 387 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 IGFBP2P18065 325 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 AGAP20933 346 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 ACVR2AP27037 513 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 PTGER4P35408 488 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 FEN1P39748 380 aaKnown RBP8.18□□□□□ -1.1
HDAC3-211ENST00000491581 PIK3CBP42338 1070 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 SERPINB8P50452 374 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 KCNJ2P63252 427 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 MRPS35P82673 323 aaKnown RBP8.18□□□□□ -1.1
HDAC3-211ENST00000491581 CAV1Q03135 178 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 PCDH1Q08174 1060 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 GALNT1Q10472 559 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-211ENST00000491581 FAM83EQ2M2I3 478 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 FAM153CQ494X1 144 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 TEX35Q5T0J7 233 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 LIPJQ5W064 366 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 CYP20A1Q6UW02 462 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 RNF111Q6ZNA4 994 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 ZCCHC7Q8N3Z6 543 aaKnown RBP8.18□□□□□ -1.1
HDAC3-211ENST00000491581 FAM109AQ8N4B1 249 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF615Q8N8J6 731 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 ZNF441Q8N8Z8 693 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 L3MBTL4Q8NA19 623 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 LILRB4Q8NHJ6 448 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 RHEBL1Q8TAI7 183 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 SLC44A1Q8WWI5 657 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 RND1Q92730 232 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 SPACA9Q96E40 222 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-211ENST00000491581 RBM18Q96H35 190 aaKnown RBP8.18□□□□□ -1.1
HDAC3-211ENST00000491581 GNRHR2Q96P88 292 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 KCNA7Q96RP8 456 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 TP63Q9H3D4 680 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-211ENST00000491581 LDAHQ9H6V9 325 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 EXO5Q9H790 373 aa8.18□□□□□ -1.1
HDAC3-211ENST00000491581 DDX31Q9H8H2 851 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms