RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SLC12A4Q9UP95 1085 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 ERVK-19Q9WJR5 959 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 PRRC2CQ9Y520 2896 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 HIVEP3Q5T1R4 2406 aa15.34■□□□□ 0.05
PDLIM2-217ENST00000491330 A0A0A6YYD5 115 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 C2orf92A0A1B0GVN3 265 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 C1orf226A1L170 272 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 LRRC14BA6NHZ5 514 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 GLOD5A6NK44 160 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 FIGNL2A6NMB9 653 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 H3BQF6 201 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 OR7A17O14581 309 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 PRKNO60260 465 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 PDE9AO76083 593 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 SUPT7LO94864 414 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 KLK1P06870 262 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 TUBBP07437 444 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 FAM153BP0C7A2 387 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 PTGER1P34995 402 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 HNRNPH2P55795 449 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF750Q32MQ0 723 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 FAM153CQ494X1 144 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 GDF7Q7Z4P5 450 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 CD163Q86VB7 1156 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 RIBC1Q8N443 379 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 RNF175Q8N4F7 328 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 FAM13CQ8NE31 585 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 OR4F6Q8NGB9 312 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 OR52B6Q8NGF0 335 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 SREK1Q8WXA9 508 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 RND1Q92730 232 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 SARAFQ96BY9 339 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 DTNBP1Q96EV8 351 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF358Q9NW07 568 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 ASB4Q9Y574 426 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF780BQ9Y6R6 833 aa15.33■□□□□ 0.04
PDLIM2-217ENST00000491330 SVILO95425 2214 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 A0A1W2PR48 441 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 TMEM200CA6NKL6 621 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 FAM166BA8MTA8 275 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 CDH16O75309 829 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 EEDO75530 441 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 ESRRBO95718 433 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 AIFM1O95831 613 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 HSD3B1P14060 373 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 HSD3B2P26439 372 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 GCAP28676 217 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 HMOX2P30519 316 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 MAN2A2P49641 1150 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 XKP51811 444 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 HSF1Q00613 529 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 CMPK2Q5EBM0 449 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 RNFT1Q5M7Z0 435 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 UBAP2Q5T6F2 1119 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 TMEM198Q66K66 360 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 MRM1Q6IN84 353 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 C16orf47Q6ZP98 133 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 SAMD14Q8IZD0 417 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 LIX1Q8N485 282 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 OR7G1Q8NGA0 311 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 TP53INP1Q96A56 240 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 SDCCAG3Q96C92 435 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 SPACA9Q96E40 222 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 TTTY12Q9BZ98 90 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 SLC24A3Q9HC58 644 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 TRPS1Q9UHF7 1281 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 ACAD8Q9UKU7 415 aa15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-217ENST00000491330 TMPRSS11DO60235 418 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 ULK1O75385 1050 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 GBAP04062 536 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 IGKV3-11P04433 115 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 RPS17P08708 135 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 HOXD4P09016 255 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 PORP16435 677 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 NT5EP21589 574 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 ATP5F1P24539 256 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 GCKP35557 465 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 TRA2BP62995 288 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 CLCQ05315 142 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 SF3B4Q15427 424 aaKnown RBP eCLIP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 WLSQ5T9L3 541 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 WDR93Q6P2C0 686 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 EMBQ6PCB8 327 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 MCEMP1Q8IX19 187 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF321PQ8N8H1 164 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 GBP7Q8N8V2 638 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 OR5M3Q8NGP4 307 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 METTL6Q8TCB7 284 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 UBLCP1Q8WVY7 318 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 PHF12Q96QT6 1004 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 SMC6Q96SB8 1091 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 MRPL1Q9BYD6 325 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 EPB41L4BQ9H329 900 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 PFDN4Q9NQP4 134 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 GIMAP4Q9NUV9 329 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 VPS29Q9UBQ0 182 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 RELNP78509 3460 aa15.31■□□□□ 0.04
PDLIM2-217ENST00000491330 A8MT66 165 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 NPIPA2E9PIF3 369 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms