RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ANKRD30BLA7E2S9 258 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 LGALS8O00214 317 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 PDXKO00764 312 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 SH2D1BO14796 132 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 CEACAM4O75871 244 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 ANXA9O76027 345 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 RPLP0P05388 317 aaKnown RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 KRT8P05787 483 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 CEBPBP17676 345 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 PAICSP22234 425 aaKnown RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 FCGR2BP31994 310 aaPredicted RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 GPR183P32249 361 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 ADRA1AP35348 466 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 MTIF2P46199 727 aaKnown RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 IFNAR2P48551 515 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 RPL27P61353 136 aaKnown RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 KLF5Q13887 457 aaPredicted RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 TMEM30BQ3MIR4 351 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 ARHGAP17Q68EM7 881 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 SULT1C3Q6IMI6 304 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 FBXL22Q6P050 247 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 ARHGAP11AQ6P4F7 1023 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 ERASQ7Z444 233 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 CATSPERDQ86XM0 798 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 RAB42Q8N4Z0 105 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 DDHD1Q8NEL9 900 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 ZNF397Q8NF99 534 aaPredicted RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 OR6S1Q8NH40 331 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 ATP8B4Q8TF62 1192 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 THRSPQ92748 146 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 MAGED4Q96JG8 741 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 TXN2Q99757 166 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 DCTN5Q9BTE1 182 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 NDUFAF3Q9BU61 184 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 TPPP3Q9BW30 176 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 RBM4Q9BWF3 364 aaKnown RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 NLNQ9BYT8 704 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 FAM124BQ9H5Z6 455 aaPredicted RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 SLC25A19Q9HC21 320 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 UBE2TQ9NPD8 197 aaPredicted RBP3.67□□□□□ -1.82
XRN1-213ENST00000489241 GTSE1Q9NYZ3 720 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 BCAP29Q9UHQ4 241 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 DUSP12Q9UNI6 340 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 PPP1R3CQ9UQK1 317 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 OR5H15A6NDH6 313 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 EDIL3O43854 480 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 HPRP00739 348 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 IGHEP01854 428 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 PCCBP05166 539 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 CA3P07451 260 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 CFC1P0CG37 223 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 CALCBP10092 127 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 GP9P14770 177 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 GNB3P16520 340 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 SELEP16581 610 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 MAT2AP31153 395 aaKnown RBP3.66□□□□□ -1.82
XRN1-213ENST00000489241 OPRL1P41146 370 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 PRPHP41219 470 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 HNMTP50135 292 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 RPS4XP62701 263 aaKnown RBP3.66□□□□□ -1.82
XRN1-213ENST00000489241 NAAAQ02083 359 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 ITPK1Q13572 414 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 LRIT3Q3SXY7 679 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 TMEM41BQ5BJD5 291 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 C1orf189Q5VU69 101 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 ADAM5Q6NVV9 412 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 NEPROQ6NW34 567 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 FIP1L1Q6UN15 594 aaKnown RBP3.66□□□□□ -1.82
XRN1-213ENST00000489241 ZNF730Q6ZMV8 503 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 Q6ZRP5 223 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 CHMP1BQ7LBR1 199 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 GRAMD2AQ8IUY3 354 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 OR9Q2Q8NGE9 314 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 OR2T34Q8NGX1 318 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 FBXO30Q8TB52 745 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 RDH11Q8TC12 318 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 HCAR2Q8TDS4 363 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 MRGPRDQ8TDS7 321 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 TCP11Q8WWU5 503 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 ZNF606Q8WXB4 792 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 LRR1Q96L50 414 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 GPA33Q99795 319 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 RAB11FIP5Q9BXF6 653 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 PINK1Q9BXM7 581 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 MRPL13Q9BYD1 178 aaKnown RBP3.66□□□□□ -1.82
XRN1-213ENST00000489241 ZNF696Q9H7X3 374 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 P2RX2Q9UBL9 471 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 KLK11Q9UBX7 282 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 LNPEPQ9UIQ6 1025 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 FOXJ3Q9UPW0 622 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 SLC6A5Q9Y345 797 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 ZNF175Q9Y473 711 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 RNF115Q9Y4L5 304 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 WIPI2Q9Y4P8 454 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.66□□□□□ -1.82
XRN1-213ENST00000489241 CUX2O14529 1486 aa3.66□□□□□ -1.82
XRN1-213ENST00000489241 RNF222A6NCQ9 220 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 TRIM49BA6NDI0 452 aa3.65□□□□□ -1.83
XRN1-213ENST00000489241 MEI4A8MW99 385 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms