RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 DHODHQ02127 395 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 WASHC5Q12768 1159 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 DRP2Q13474 957 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 PDK1Q15118 436 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 KRT31Q15323 416 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ZFP69Q49AA0 526 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 WLSQ5T9L3 541 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 CNSTQ6PJW8 725 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 Q71RC1 249 aaPredicted RBP4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 NLRP14Q86W24 1093 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ELMOD1Q8N336 334 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 CCNYQ8ND76 341 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 OR52E1Q8NGJ3 308 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 OR2T6Q8NHC8 308 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 EXOC6Q8TAG9 804 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 SLCO4A1Q96BD0 722 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ERGIC2Q96RQ1 377 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 SSX3Q99909 188 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 SYT15Q9BQS2 421 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 CARD9Q9H257 536 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 TMEM245Q9H330 911 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 DPEP3Q9H4B8 488 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 MTHFD2LQ9H903 347 aaPredicted RBP4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 SYTL2Q9HCH5 934 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 PIGVQ9NUD9 493 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 NDUFA13Q9P0J0 144 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 KLHL8Q9P2G9 620 aaPredicted RBP4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 LNPEPQ9UIQ6 1025 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ODF2LQ9ULJ1 636 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 OR1A2Q9Y585 309 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ADAMTS7Q9UKP4 1686 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ARFGEF2Q9Y6D5 1785 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ANKRD31Q8N7Z5 1873 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 TJP1Q07157 1748 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 NRXN2Q9P2S2 1712 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 KDM6AO15550 1401 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 MACROD2A1Z1Q3 448 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 ANHXE9PGG2 379 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 PRR23D1E9PI22 279 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 TLX2O43763 284 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 ZFAND5O76080 213 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 SLC4A1P02730 911 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 PRR23D2P0DMB1 279 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 MYOGP15173 224 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 GAP43P17677 238 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 PRKACGP22612 351 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 STIP1P31948 543 aaKnown RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 LUMP51884 338 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 CRIP2P52943 208 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 EVCP57679 992 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 KCNK10P57789 538 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 SRP54P61011 504 aaKnown RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 MSLNQ13421 630 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 TSTA3Q13630 321 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 FAM189A2Q15884 450 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 PARP10Q53GL7 1025 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 PRAMEF7Q5VXH5 474 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 C1orf186Q6ZWK4 172 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 ZER1Q7Z7L7 766 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 ADAMTSL2Q86TH1 951 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 CACUL1Q86Y37 369 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 CCDC197Q8NCU1 140 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 TMEM185AQ8NFB2 350 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF519Q8TB69 540 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 ATP8B4Q8TF62 1192 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 SLC13A3Q8WWT9 602 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 CNRIP1Q96F85 164 aaPredicted RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 CDHR1Q96JP9 859 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 CXorf58Q96LI9 332 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 KRT12Q99456 494 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 RBM4Q9BWF3 364 aaKnown RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 NUSAP1Q9BXS6 441 aaKnown RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 XPO4Q9C0E2 1151 aaKnown RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 ABCG4Q9H172 646 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 DCLRE1BQ9H816 532 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 MARCH7Q9H992 704 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 DDX28Q9NUL7 540 aaKnown RBP4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 TRIM10Q9UDY6 481 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 TSPAN16Q9UKR8 245 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 TRPM7Q96QT4 1865 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 LTBP1Q14766 1721 aa4.23□□□□□ -1.73
PRPF38A-203ENST00000487160 UMODL1Q5DID0 1318 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 PCDH11XQ9BZA7 1347 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 ADAMTSL1Q8N6G6 1762 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 EDC4Q6P2E9 1401 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 CASP8AP2Q9UKL3 1982 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 KRT87PA6NCN2 255 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 OGTO15294 1046 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 REC8O95072 547 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 DUS4LO95620 317 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 FGF19O95750 216 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 ANGPTL1O95841 491 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 ALPPP05187 535 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 ALPPL2P10696 532 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF18P17022 549 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 EDNRAP25101 427 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 HMGB2P26583 209 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 GPR183P32249 361 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 NSFP46459 744 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 PITPNBP48739 271 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms