RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ACSL3O95573 720 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 IGKV3-11P04433 115 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 CRHP06850 196 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 F7P08709 466 aaPredicted RBP6.97□□□□□ -1.29
PDPN-205ENST00000487038 POU2F1P14859 743 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 CPN1P15169 458 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 IDUAP35475 653 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 KCNJ5P48544 419 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 KCNC1P48547 511 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 NR1H2P55055 460 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 NRG3P56975 720 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 RPS4XP62701 263 aaKnown RBP6.97□□□□□ -1.29
PDPN-205ENST00000487038 ADPRMQ3LIE5 342 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 KBTBD12Q3ZCT8 623 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 DCST1Q5T197 706 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 PAQR3Q6TCH7 311 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 LYPD8Q6UX82 237 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 P4HA3Q7Z4N8 544 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 MILR1Q7Z6M3 343 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 KIAA1328Q86T90 577 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 CTAGE6Q86UF2 777 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 GRAMD2AQ8IUY3 354 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 RBM18Q96H35 190 aaKnown RBP6.97□□□□□ -1.29
PDPN-205ENST00000487038 SENP5Q96HI0 755 aaPredicted RBP6.97□□□□□ -1.29
PDPN-205ENST00000487038 TMEM41AQ96HV5 264 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 HES6Q96HZ4 224 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 WFIKKN1Q96NZ8 548 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 QRFPRQ96P65 431 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 KCNC2Q96PR1 638 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 UCN2Q96RP3 112 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 NDNQ99608 321 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 EGFL8Q99944 293 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 TUBA1CQ9BQE3 449 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 SLC39A3Q9BRY0 314 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 WWTR1Q9GZV5 400 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 AICDAQ9GZX7 198 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 SNX15Q9NRS6 342 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 ELOVL5Q9NYP7 299 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 PTBP2Q9UKA9 531 aaKnown RBP6.97□□□□□ -1.29
PDPN-205ENST00000487038 FBXO5Q9UKT4 447 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 SLC22A14Q9Y267 594 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 USF3Q68DE3 2245 aa6.97□□□□□ -1.29
PDPN-205ENST00000487038 A0A087X1B8 175 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 UQCRHLA0A096LP55 91 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 MYOCOSA0A1B0GUC4 107 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 CDC7O00311 574 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 WDR47O94967 919 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 FTCDO95954 541 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 C1GALT1C1LP0DN25 315 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 KRT15P19012 456 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 CPN2P22792 545 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 UGT2B10P36537 528 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 SLCO1A2P46721 670 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 HNMTP50135 292 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 NAGLUP54802 743 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 HERVK_113P63132 956 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 ERVK-8P63133 956 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 OCRLQ01968 901 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 PCDH1Q08174 1060 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 FAM27E3Q08E93 113 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 GPS1Q13098 491 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 TBX2Q13207 712 aaPredicted RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 SLBPQ14493 270 aaKnown RBP eCLIP6.96□□□□□ -1.3
PDPN-205ENST00000487038 FGFBP1Q14512 234 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 EBPQ15125 230 aaKnown RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 CCNG2Q16589 344 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 SPRED3Q2MJR0 410 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 EIPR1Q53HC9 387 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 BEX5Q5H9J7 111 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 HLA-DQA1Q5Y7H0 255 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 ABHD17CQ6PCB6 329 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 AAGABQ6PD74 315 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 DRICH1Q6PGQ1 229 aaPredicted RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 ZNF704Q6ZNC4 412 aaPredicted RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 FRA10AC1Q70Z53 315 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 CHMP1BQ7LBR1 199 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 IFNEQ86WN2 208 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 ZNF611Q8N823 705 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 CNEP1R1Q8N9A8 125 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 MAPK1IP1LQ8NDC0 245 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 FAM83FQ8NEG4 500 aaPredicted RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 OR1J4Q8NGS1 313 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 SLC44A1Q8WWI5 657 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 ZBED6CLQ96FA7 236 aaPredicted RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 ZC3HAV1LQ96H79 300 aaKnown RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 GNRHR2Q96P88 292 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 HS3ST6Q96QI5 342 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 KRT12Q99456 494 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 ERVK-6Q9BXR3 956 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 CAPS2Q9BXY5 557 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 ANGPTL4Q9BY76 406 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 REG4Q9BYZ8 158 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 NT5DC2Q9H857 520 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 ACTR8Q9H981 624 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 XAB2Q9HCS7 855 aaKnown RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 TEX10Q9NXF1 929 aaPredicted RBP6.96□□□□□ -1.3
PDPN-205ENST00000487038 MS4A12Q9NXJ0 267 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 CLCF1Q9UBD9 225 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 LPAR3Q9UBY5 353 aa6.96□□□□□ -1.3
PDPN-205ENST00000487038 FETUBQ9UGM5 382 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms