RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 DEPPQ9NTK1 212 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 VPS29Q9UBQ0 182 aa16.35■□□□□ 0.21
COL6A1-204ENST00000486023 MAST4O15021 2626 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 FAM166BA8MTA8 275 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 GLRA3O75311 464 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 SLC35E2P0CK97 266 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 FEN1P39748 380 aaKnown RBP16.34■□□□□ 0.21
COL6A1-204ENST00000486023 CA7P43166 264 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 CCT5P48643 541 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 GALNT1Q10472 559 aaPredicted RBP16.34■□□□□ 0.21
COL6A1-204ENST00000486023 PIGGQ5H8A4 983 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 C6orf163Q5TEZ5 329 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 FAM180BQ6P0A1 224 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 RTL4Q6ZR62 310 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 FAM47EQ6ZV65 393 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 GPALPP1Q8IXQ4 340 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 C4orf33Q8N1A6 199 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 EIF1ADQ8N9N8 165 aaKnown RBP16.34■□□□□ 0.21
COL6A1-204ENST00000486023 POGLUT1Q8NBL1 392 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 MYRIPQ8NFW9 859 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 OR5M3Q8NGP4 307 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 OR2W6PQ8NHA6 318 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 CCDC120Q96HB5 630 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 ZNF382Q96SR6 550 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 SHCBP1LQ9BZQ2 653 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 ANKZF1Q9H8Y5 726 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 MID1IP1Q9NPA3 183 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.34■□□□□ 0.212e-10■■■□□ 14.7
COL6A1-204ENST00000486023 ADAM29Q9UKF5 820 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 EMCNQ9ULC0 261 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 PPT2Q9UMR5 302 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 ZGRF1Q86YA3 2104 aa16.34■□□□□ 0.21
COL6A1-204ENST00000486023 A0A0G2JMM0 328 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 A0A1W2PPB8 328 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 A0A1W2PRS3 328 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 KIR3DP1A8MWS1 328 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 COPEO14579 308 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 GUCY1B2O75343 617 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 CRCPO75575 148 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 IGKV3-11P04433 115 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 P04436 131 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 SSTR4P31391 388 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 DNASE1L1P49184 302 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 HTR6P50406 440 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 PPIAP62937 165 aaKnown RBP16.33■□□□□ 0.2
COL6A1-204ENST00000486023 HMGCS1Q01581 520 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 TBL3Q12788 808 aaKnown RBP16.33■□□□□ 0.2
COL6A1-204ENST00000486023 LCP2Q13094 533 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.33■□□□□ 0.2
COL6A1-204ENST00000486023 CFAP157Q5JU67 520 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 HLA-DQA1Q5Y7H0 255 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 FAM13CQ8NE31 585 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 OR2M7Q8NG81 312 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 OR52N2Q8NGI0 321 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 SLC22A8Q8TCC7 542 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 TM4SF18Q96CE8 201 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 BRINP2Q9C0B6 783 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 BRF2Q9HAW0 419 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 PFDN4Q9NQP4 134 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL6A1-204ENST00000486023 V9GYY5 206 aaPredicted RBP16.33■□□□□ 0.2
COL6A1-204ENST00000486023 DOPEY1Q5JWR5 2465 aa16.33■□□□□ 0.2
COL6A1-204ENST00000486023 A0A1B0GTH9 108 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 GNG14A0A1W2PPG7 69 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 G3V2L1 256 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 LRATO95237 230 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 CT62P0C5K7 136 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 CCL3P10147 92 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 KRT4P19013 534 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 CNR1P21554 472 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 PIGAP37287 484 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 NR0B1P51843 470 aaKnown RBP16.32■□□□□ 0.2
COL6A1-204ENST00000486023 NAGLUP54802 743 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 VSNL1P62760 191 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 SPDYAQ5MJ70 313 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 ZYG11AQ6WRX3 759 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 TMEM64Q6YI46 380 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 NCCRP1Q6ZVX7 275 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-204ENST00000486023 MRGPRGQ86SM5 289 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 GALNT12Q8IXK2 581 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 NUBPLQ8TB37 319 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 KLHL29Q96CT2 875 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 L3HYPDHQ96EM0 354 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 WWTR1Q9GZV5 400 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 GSTO2Q9H4Y5 243 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 SACM1LQ9NTJ5 587 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 BCAP29Q9UHQ4 241 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 GRID1Q9ULK0 1009 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 PCDHA9Q9Y5H5 950 aa16.32■□□□□ 0.2
COL6A1-204ENST00000486023 C2orf92A0A1B0GVN3 265 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 C1orf226A1L170 272 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CCDC151A5D8V7 595 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PRSS44E7EML9 344 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 ACOT7O00154 380 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PRRG2O14669 202 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PROCP04070 461 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 TPOP07202 933 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CPMP14384 443 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 CPA3P15088 417 aa16.31■□□□□ 0.2
COL6A1-204ENST00000486023 PORP16435 677 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms