RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GABRA1P14867 456 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SERPINB3P29508 390 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 PIGAP37287 484 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ZFP36L2P47974 494 aaKnown RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 SLC37A1P57057 533 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ETF1P62495 437 aaKnown RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 DDX39BQ13838 428 aaKnown RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 NTRK2Q16620 822 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 PFKFB4Q16877 469 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 C1orf185Q5T7R7 199 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 RIPPLY2Q5TAB7 128 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 MROH9Q5TGP6 573 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF585AQ6P3V2 769 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 KLC3Q6P597 504 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 RNF111Q6ZNA4 994 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 GOLGA7Q7Z5G4 137 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 LRRC25Q8N386 305 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF441Q8N8Z8 693 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 MYRIPQ8NFW9 859 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 OR5M9Q8NGP3 310 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 MTERF1Q99551 399 aaKnown RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 FUT8Q9BYC5 575 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 WWTR1Q9GZV5 400 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF703Q9H7S9 590 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 IPPKQ9H8X2 491 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 PRM3Q9NNZ6 103 aa10.56□□□□□ -0.72
SCFD1-206ENST00000484733 CHCHD2Q9Y6H1 151 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-206ENST00000484733 TMPRSS11DO60235 418 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 EEDO75530 441 aaKnown RBP10.55□□□□□ -0.72
SCFD1-206ENST00000484733 CELA3AP09093 270 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 NR2F6P10588 404 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 HERVK_113P63132 956 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ERVK-8P63133 956 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF267Q14586 743 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-206ENST00000484733 EBPQ15125 230 aaKnown RBP10.55□□□□□ -0.72
SCFD1-206ENST00000484733 SLC25A35Q3KQZ1 300 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 TBCELQ5QJ74 424 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 C10orf62Q5T681 223 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-206ENST00000484733 CYP20A1Q6UW02 462 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 RELL1Q8IUW5 271 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 CLYBLQ8N0X4 340 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 SREK1Q8WXA9 508 aaKnown RBP10.55□□□□□ -0.72
SCFD1-206ENST00000484733 RIT1Q92963 219 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 SERPINI1Q99574 410 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ERVK-6Q9BXR3 956 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 LDAHQ9H6V9 325 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 WDR41Q9HAD4 459 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ZDHHC18Q9NUE0 388 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ITGB1BP2Q9UKP3 347 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ACAD8Q9UKU7 415 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ERVK-19Q9WJR5 959 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF407Q9C0G0 2248 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 A0A096LPK6 155 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 LRRC3CA6NJW4 275 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 CAPN14A8MX76 684 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 OR10H2O60403 315 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 SERPINB8P50452 374 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 TECRLQ5HYJ1 363 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 CES4AQ5XG92 561 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 OR52E8Q6IFG1 317 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 NUDT13Q86X67 352 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 TAGAPQ8N103 731 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ISL2Q96A47 359 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 NTNG2Q96CW9 530 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 SECISBP2Q96T21 854 aaKnown RBP10.55□□□□□ -0.72
SCFD1-206ENST00000484733 NTMT1Q9BV86 223 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 CNPPD1Q9BV87 410 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 ADAM29Q9UKF5 820 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 RNF11Q9Y3C5 154 aa10.55□□□□□ -0.72
SCFD1-206ENST00000484733 A0A0G2JNJ9 132 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 LRRC14BA6NHZ5 514 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 TRIM3O75382 744 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-206ENST00000484733 PRKRAO75569 313 aaKnown RBP10.54□□□□□ -0.72
SCFD1-206ENST00000484733 CLDN9O95484 217 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 AIFM1O95831 613 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 ENDOUP21128 410 aaKnown RBP10.54□□□□□ -0.72
SCFD1-206ENST00000484733 PHBP35232 272 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 MAGEA12P43365 314 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 FUT7Q11130 342 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 CPSF6Q16630 551 aaKnown RBP eCLIP10.54□□□□□ -0.72
SCFD1-206ENST00000484733 MYLK4Q86YV6 388 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-206ENST00000484733 OR10Q1Q8NGQ4 319 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 NEIL3Q8TAT5 605 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 ZNF559Q9BR84 538 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 SPRR3Q9UBC9 169 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 Q9UFV3 132 aa10.54□□□□□ -0.72
SCFD1-206ENST00000484733 STX16-NPEPL1H3BU86 382 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 OR7A17O14581 309 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 STX16O14662 325 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 ALDOAP04075 364 aaKnown RBP10.53□□□□□ -0.72
SCFD1-206ENST00000484733 RBP1P09455 135 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 RFPL3SP0C7P2 107 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 TYK2P29597 1187 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 KCNJ2P63252 427 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 OR7G1Q8NGA0 311 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 OR10G3Q8NGC4 313 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 ACSS3Q9H6R3 686 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 EXO5Q9H790 373 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 CXorf21Q9HAI6 301 aa10.53□□□□□ -0.72
SCFD1-206ENST00000484733 CPSF2Q9P2I0 782 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms