RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ABCD2Q9UBJ2 740 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 CDV3Q9UKY7 258 aaKnown RBP16.5■□□□□ 0.23
UPF3A-206ENST00000480362 SATB2Q9UPW6 733 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 TGFBR3LH3BV60 316 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 PDE5AO76074 875 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 KCNK5O95279 499 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 C1QCP02747 245 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 MAOAP21397 527 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 OCA2Q04671 838 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 GAB1Q13480 694 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 CEACAM7Q14002 265 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 LTB4RQ15722 352 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 MINDY4Q4G0A6 757 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 PIGGQ5H8A4 983 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 PGM2L1Q6PCE3 622 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 OVCH1Q7RTY7 1134 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 ULK2Q8IYT8 1036 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 FBXW8Q8N3Y1 598 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 RNF148Q8N7C7 305 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 OR9A2Q8NGT5 310 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 OR5AK3PQ8NH89 298 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 PTCHD1Q96NR3 888 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 DPH2Q9BQC3 489 aaPredicted RBP16.49■□□□□ 0.23
UPF3A-206ENST00000480362 ALOXE3Q9BYJ1 711 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 TGIF2Q9GZN2 237 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 IKZF5Q9H5V7 419 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 AKIRIN1Q9H9L7 192 aaPredicted RBP16.49■□□□□ 0.23
UPF3A-206ENST00000480362 TPT1P8Q9HAU6 139 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 NEUROD4Q9HD90 331 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 NECTIN3Q9NQS3 549 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 IFT80Q9P2H3 777 aaPredicted RBP16.49■□□□□ 0.23
UPF3A-206ENST00000480362 CTSFQ9UBX1 484 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 MMACHCQ9Y4U1 282 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 CLDN16Q9Y5I7 305 aa16.49■□□□□ 0.23
UPF3A-206ENST00000480362 IGLV3-12A0A075B6K2 115 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 FAM149AA5PLN7 773 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 EVPLLA8MZ36 301 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 SORBS2O94875 1100 aaKnown RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 SLC35E2P0CK97 266 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 NT5EP21589 574 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 CHI3L1P36222 383 aaPredicted RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 CCT3P49368 545 aaKnown RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 EEFSECP57772 596 aaKnown RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 IGLV3-21P80748 117 aaPredicted RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 DMTNQ08495 405 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 SPDYE7PQ495Y7 208 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 SAMD4BQ5PRF9 694 aaKnown RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 MLIPQ5VWP3 458 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 HPS6Q86YV9 775 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 PRSS58Q8IYP2 241 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 GALNT6Q8NCL4 622 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 ADCY4Q8NFM4 1077 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 STT3BQ8TCJ2 826 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 KAT2AQ92830 837 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 MR1Q95460 341 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 PPWD1Q96BP3 646 aaKnown RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 ECSITQ9BQ95 431 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 SEMA3GQ9NS98 782 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 GMPR2Q9P2T1 348 aaKnown RBP16.48■□□□□ 0.23
UPF3A-206ENST00000480362 CD300AQ9UGN4 299 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 ACSL6Q9UKU0 697 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 PCDHGA3Q9Y5H0 932 aa16.48■□□□□ 0.23
UPF3A-206ENST00000480362 RNF103-CHMP3A0A140T963 221 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 TEX51A0A1B0GUA7 166 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 PRORSD1PA6NEY8 169 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 C9orf172C9J069 976 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 OR10H2O60403 315 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 STK17BO94768 372 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 KRT75O95678 551 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 ATP1B1P05026 303 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 ZGLP1P0C6A0 271 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 PPIBP23284 216 aaKnown RBP16.47■□□□□ 0.23
UPF3A-206ENST00000480362 ME2P23368 584 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 RHAGQ02094 409 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 LIPEQ05469 1076 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 BIKQ13323 160 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 SERTAD2Q14140 314 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 TMEM164Q5U3C3 297 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 CPZQ66K79 652 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 FAM199XQ6PEV8 388 aaPredicted RBP16.47■□□□□ 0.23
UPF3A-206ENST00000480362 TMEM107Q6UX40 140 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 QSOX2Q6ZRP7 698 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 LAPTM4BQ86VI4 370 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 MARCH9Q86YJ5 346 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 PNPT1Q8TCS8 783 aaKnown RBP16.47■□□□□ 0.23
UPF3A-206ENST00000480362 DOK4Q8TEW6 326 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 ADAMTS14Q8WXS8 1223 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 ELP4Q96EB1 424 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 RBM18Q96H35 190 aaKnown RBP16.47■□□□□ 0.23
UPF3A-206ENST00000480362 MAGED4Q96JG8 741 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 CHST8Q9H2A9 424 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 PIF1Q9H611 641 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 EPS8L2Q9H6S3 715 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 MKL2Q9ULH7 1088 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 AP3M1Q9Y2T2 418 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 GMEB1Q9Y692 573 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 FER1L5A0AVI2 2057 aa16.47■□□□□ 0.23
UPF3A-206ENST00000480362 NUP214P35658 2090 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 VSTM2BA6NLU5 285 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms