RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ERVK-8P63133 956 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 FAM27E3Q08E93 113 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 DOC2AQ14183 400 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 EBPQ15125 230 aaKnown RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 TSNQ15631 228 aaKnown RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 ARMC3Q5W041 872 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 C18orf63Q68DL7 685 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 YRDCQ86U90 279 aaKnown RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 KIF18BQ86Y91 864 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 LMNTD2Q8IXW0 634 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 PRR22Q8IZ63 422 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 GCNT2Q8N0V5 402 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 LRRC75A-AS1Q8N1F1 130 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 LIX1Q8N485 282 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 RNF10Q8N5U6 811 aaKnown RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 ZNF441Q8N8Z8 693 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 ACOT4Q8N9L9 421 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 CALML6Q8TD86 181 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 IGFBPL1Q8WX77 278 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 ATL1Q8WXF7 558 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 RHBDF1Q96CC6 855 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 PDLIM5Q96HC4 596 aaKnown RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 MS4A14Q96JA4 679 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 MARK4Q96L34 752 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 RILPQ96NA2 401 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 DACH2Q96NX9 599 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 WFIKKN1Q96NZ8 548 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 GAL3ST4Q96RP7 486 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 DOHHQ9BU89 302 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 ERVK-6Q9BXR3 956 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 WWTR1Q9GZV5 400 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 XAB2Q9HCS7 855 aaKnown RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 QPCTLQ9NXS2 382 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 FOXD3Q9UJU5 478 aaPredicted RBP8.9□□□□□ -0.98
COL4A5-204ENST00000477429 ERVK-19Q9WJR5 959 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 VWA7Q9Y334 891 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 TESMINQ9Y4I5 508 aa8.9□□□□□ -0.98
COL4A5-204ENST00000477429 RAI1Q7Z5J4 1906 aaPredicted RBP8.9□□□□□ -0.99
COL4A5-204ENST00000477429 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 NCF1BA6NI72 391 aaPredicted RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 C17orf51A8MQB3 221 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 NCF1CA8MVU1 366 aaPredicted RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 ARHGEF9O43307 516 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 CRLF1O75462 422 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 TNFSF13O75888 250 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 ENO2P09104 434 aaPredicted RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 TMIGD3P0DMS9 266 aaPredicted RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 NCF1P14598 390 aaPredicted RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 PGAM1P18669 254 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 CCKARP32238 428 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 TAS2R39P59534 338 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 SARNPP82979 210 aaKnown RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 EFTUD2Q15029 972 aaKnown RBP eCLIP8.89□□□□□ -0.991e-5■□□□□ 8.3
COL4A5-204ENST00000477429 NTRK2Q16620 822 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 NHSL2Q5HYW2 709 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 RNASEH2BQ5TBB1 312 aaKnown RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 TRIM40Q6P9F5 258 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 ADGRE4PQ86SQ3 457 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 SIMC1Q8NDZ2 872 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 SMPDL3BQ92485 455 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 INTS12Q96CB8 462 aaKnown RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 HSPBAP1Q96EW2 488 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 PIP5K1AQ99755 562 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 MS4A8Q9BY19 250 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 TRIM54Q9BYV2 358 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 RBSNQ9H1K0 784 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 NT5DC2Q9H857 520 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 UBTD1Q9HAC8 227 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 LYRM4Q9HD34 91 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 KLHL28Q9NXS3 571 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 CNIH4Q9P003 139 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 MRPS33Q9Y291 106 aaKnown RBP8.89□□□□□ -0.99
COL4A5-204ENST00000477429 ZKSCAN5Q9Y2L8 839 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 C15orf41Q9Y2V0 281 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 OARD1Q9Y530 152 aa8.89□□□□□ -0.99
COL4A5-204ENST00000477429 GLOD5A6NK44 160 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 FAM171A2A8MVW0 826 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 A8MXE2 369 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 GNB5O14775 395 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 CTIFO43310 598 aaKnown RBP8.88□□□□□ -0.99
COL4A5-204ENST00000477429 CNOT4O95628 575 aaKnown RBP8.88□□□□□ -0.99
COL4A5-204ENST00000477429 TGM6O95932 706 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 IL18BPO95998 194 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 TGFB1P01137 390 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 CT62P0C5K7 136 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 GNAZP19086 355 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 HIST1H1TP22492 207 aaPredicted RBP8.88□□□□□ -0.99
COL4A5-204ENST00000477429 PTPN6P29350 595 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 SSTR4P31391 388 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 OPRM1P35372 400 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 PTGDSP41222 190 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 CASP3P42574 277 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 MSH2P43246 934 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 KCNC1P48547 511 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 HSPA7P48741 367 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 STARP49675 285 aa8.88□□□□□ -0.99
COL4A5-204ENST00000477429 HNRNPH2P55795 449 aaKnown RBP8.88□□□□□ -0.99
COL4A5-204ENST00000477429 SERTAD2Q14140 314 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms