RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 PRKNO60260 465 aaPredicted RBP18.97■□□□□ 0.63
SNX13-206ENST00000474067 DLX3O60479 287 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 ZG16O60844 167 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 OR6B1O95007 311 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 OR4F21O95013 312 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 SBK3P0C264 359 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 PORP16435 677 aaPredicted RBP18.97■□□□□ 0.63
SNX13-206ENST00000474067 ASPHQ12797 758 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 ART3Q13508 389 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 CFAP157Q5JU67 520 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 TBCELQ5QJ74 424 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 FAM47EQ6ZV65 393 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 CDYL2Q8N8U2 506 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 CCDC63Q8NA47 563 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 OR7G1Q8NGA0 311 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 TP53INP1Q96A56 240 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 PPWD1Q96BP3 646 aaKnown RBP18.97■□□□□ 0.63
SNX13-206ENST00000474067 TMEM237Q96Q45 408 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 CNIH4Q9P003 139 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 KLF2Q9Y5W3 355 aaPredicted RBP18.97■□□□□ 0.63
SNX13-206ENST00000474067 ZNF780BQ9Y6R6 833 aa18.97■□□□□ 0.63
SNX13-206ENST00000474067 SETXQ7Z333 2677 aaKnown RBP18.96■□□□□ 0.63
SNX13-206ENST00000474067 MYOCOSA0A1B0GUC4 107 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 GLOD5A6NK44 160 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 TP53I11O14683 189 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 CRCPO75575 148 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 ESRRBO95718 433 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 GBAP04062 536 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 ST13P50502 369 aaKnown RBP18.96■□□□□ 0.63
SNX13-206ENST00000474067 HEPACAMQ14CZ8 416 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 UNC50Q53HI1 259 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 SLC22A10Q63ZE4 541 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 SLC48A1Q6P1K1 146 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 MDGA2Q7Z553 956 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 C17orf47Q8NEP4 570 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 OR2M7Q8NG81 312 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 GAL3ST4Q96RP7 486 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 CHST11Q9NPF2 352 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 GIMAP4Q9NUV9 329 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 MCM8Q9UJA3 840 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 PCDHA9Q9Y5H5 950 aa18.96■□□□□ 0.63
SNX13-206ENST00000474067 C2orf92A0A1B0GVN3 265 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 MANBAO00462 879 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 COPEO14579 308 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 CSNK2A2P19784 350 aaPredicted RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 PTGS2P35354 604 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 XKP51811 444 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 GPR85P60893 370 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 ACSM2AQ08AH3 577 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 ACSM2BQ68CK6 577 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 ZYG11AQ6WRX3 759 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 C9orf40Q8IXQ3 194 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 PHF10Q8WUB8 498 aaKnown RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 SPACA9Q96E40 222 aaPredicted RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 CCDC120Q96HB5 630 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 WWTR1Q9GZV5 400 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 TSPAN10Q9H1Z9 355 aaPredicted RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 LIN28AQ9H9Z2 209 aaKnown RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 CXorf21Q9HAI6 301 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 IL1RL2Q9HB29 575 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 TEX10Q9NXF1 929 aaPredicted RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 SH3BGRL2Q9UJC5 107 aa18.95■□□□□ 0.62
SNX13-206ENST00000474067 BOKQ9UMX3 212 aaPredicted RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 PRRC2CQ9Y520 2896 aaKnown RBP18.95■□□□□ 0.62
SNX13-206ENST00000474067 USP9XQ93008 2570 aaPredicted RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 SERTM1A2A2V5 107 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 E9PLN8 166 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 CDC40O60508 579 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNX13-206ENST00000474067 BCAS2O75934 225 aaPredicted RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 CLDN1O95832 211 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 RNF224P0DH78 156 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 CPMP14384 443 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 DRD2P14416 443 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 TSPAN8P19075 237 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 NT5EP21589 574 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 CRHR1P34998 444 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 SLC37A1P57057 533 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 PPIAP62937 165 aaKnown RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 PSPHP78330 225 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 EBPQ15125 230 aaKnown RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 IMPG1Q17R60 797 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 TMEM211Q6ICI0 200 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 MRGPRGQ86SM5 289 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 GSPT2Q8IYD1 628 aaKnown RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 FAM109AQ8N4B1 249 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 C1orf52Q8N6N3 182 aaKnown RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 CCNYL1Q8N7R7 359 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 ZNF321PQ8N8H1 164 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 MZB1Q8WU39 189 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 SREK1Q8WXA9 508 aaKnown RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 VKORC1Q9BQB6 163 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 EPB41L4BQ9H329 900 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 B4GALT7Q9UBV7 327 aa18.94■□□□□ 0.62
SNX13-206ENST00000474067 SPTBN1Q01082 2364 aaKnown RBP18.94■□□□□ 0.62
SNX13-206ENST00000474067 GNG14A0A1W2PPG7 69 aa18.93■□□□□ 0.62
SNX13-206ENST00000474067 OR14I1A6ND48 311 aa18.93■□□□□ 0.62
SNX13-206ENST00000474067 PGRMC2O15173 223 aa18.93■□□□□ 0.62
SNX13-206ENST00000474067 HS6ST1O60243 411 aa18.93■□□□□ 0.62
SNX13-206ENST00000474067 PRKRAO75569 313 aaKnown RBP18.93■□□□□ 0.62
SNX13-206ENST00000474067 ATP1B1P05026 303 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms