RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SLC35E2P0CK97 266 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 CD1EP15812 388 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ITIH1P19827 911 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC6A2P23975 617 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 CDKN2CP42773 168 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 WNT3P56703 355 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 PCBP4P57723 403 aaKnown RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 PHC1P78364 1004 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 TXNL4AP83876 142 aaKnown RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 HPCAP84074 193 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ID2Q02363 134 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 LIPEQ05469 1076 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 VAC14Q08AM6 782 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 FADDQ13158 208 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 FLOT2Q14254 428 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 GNA13Q14344 377 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 RUNDC3AQ59EK9 446 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 RABL3Q5HYI8 236 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ATAD3BQ5T9A4 648 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ERICH5Q6P6B1 374 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 TMEM107Q6UX40 140 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 C6orf15Q6UXA7 325 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 DLEU7Q6UYE1 221 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 TMEM64Q6YI46 380 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 QSOX2Q6ZRP7 698 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 NET1Q7Z628 596 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 GALNT12Q8IXK2 581 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ST13P4Q8IZP2 240 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 RNF148Q8N7C7 305 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 OR2T12Q8NG77 320 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 OR9A2Q8NGT5 310 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 GOT1L1Q8NHS2 421 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 PNPT1Q8TCS8 783 aaKnown RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 RIT1Q92963 219 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 CNRIP1Q96F85 164 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 RSRC1Q96IZ7 334 aaKnown RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 VPS50Q96JG6 964 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ZNF578Q96N58 590 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 MS4A4EQ96PG1 132 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 ALOXE3Q9BYJ1 711 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 SERHLQ9NQF3 203 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 PTGFRNQ9P2B2 879 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 TMEM181Q9P2C4 612 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 SUCOQ9UBS9 1254 aaKnown RBP9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 COPS7AQ9UBW8 275 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 MAGEL2Q9UJ55 1249 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 CES1P1Q9UKY3 287 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 SATB2Q9UPW6 733 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 CLCA3PQ9Y6N3 262 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 A0A0C4DFX4 3053 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 OTOGLQ3ZCN5 2332 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM220BPB1ANY3 271 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 FXYD1O00168 92 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 NME4O00746 187 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 BRINP1O60477 761 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 STK17BO94768 372 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 MED26O95402 600 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 TIAF1O95411 115 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 AGR2O95994 175 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ALBP02768 609 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ATP1B1P05026 303 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 MAOAP21397 527 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 MC3RP41968 323 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 FRKP42685 505 aaPredicted RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 MAGEA8P43361 318 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 STT3AP46977 705 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 CDK9P50750 372 aaKnown RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 PGDP52209 483 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 CORO7P57737 925 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF155Q12901 538 aaPredicted RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ERV3-1Q14264 604 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 NSDHLQ15738 373 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 GTDC1Q4AE62 458 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 GCNT6Q5T4J0 391 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 INTS11Q5TA45 600 aaKnown RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 OVCH1Q7RTY7 1134 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 SLCO6A1Q86UG4 719 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 HPS6Q86YV9 775 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC30A8Q8IWU4 369 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 VWA5B2Q8N398 1253 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 DTWD1Q8N5C7 304 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 BMPERQ8N8U9 685 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 GALNT6Q8NCL4 622 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 NUP43Q8NFH3 380 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 OR52N2Q8NGI0 321 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 OR10A6Q8NH74 314 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 STT3BQ8TCJ2 826 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 TMEM125Q96AQ2 219 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 ASB9Q96DX5 294 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 RNF31Q96EP0 1072 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 AURKBQ96GD4 344 aaPredicted RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 CLPTM1LQ96KA5 538 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 LRFN5Q96NI6 719 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 PHF12Q96QT6 1004 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 CPPED1Q9BRF8 314 aaPredicted RBP9.64□□□□□ -0.87
PRPF38A-202ENST00000474048 GPATCH1Q9BRR8 931 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms