RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 NMRK1Q9NWW6 199 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 FETUBQ9UGM5 382 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 SNX6Q9UNH7 406 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 CREBBPQ92793 2442 aa17.66■□□□□ 0.42
COL7A1-207ENST00000467985 UQCRHLA0A096LP55 91 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 A0A1B0GTH9 108 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 CCDC151A5D8V7 595 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 GLOD5A6NK44 160 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 CDC40O60508 579 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL7A1-207ENST00000467985 GUCY1B2O75343 617 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 PRKRAO75569 313 aaKnown RBP17.65■□□□□ 0.42
COL7A1-207ENST00000467985 P04436 131 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 CNR1P21554 472 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 PIK3R1P27986 724 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 HTR1EP28566 365 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 PPIAP62937 165 aaKnown RBP17.65■□□□□ 0.42
COL7A1-207ENST00000467985 HERVK_113P63132 956 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 ADORA2A-AS1P86434 159 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 ASPHQ12797 758 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 ZNF750Q32MQ0 723 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 RNF111Q6ZNA4 994 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 FGD2Q7Z6J4 655 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 TMEM151AQ8N4L1 468 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 FAM57AQ8TBR7 257 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 TRPC4APQ8TEL6 797 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 SREK1Q8WXA9 508 aaKnown RBP17.65■□□□□ 0.42
COL7A1-207ENST00000467985 MARVELD3Q96A59 401 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 ERVK-6Q9BXR3 956 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 BRF2Q9HAW0 419 aa17.65■□□□□ 0.42
COL7A1-207ENST00000467985 NCOA6Q14686 2063 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-207ENST00000467985 GBAP04062 536 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 KLK1P06870 262 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 SBK3P0C264 359 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 GCAP28676 217 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 ERVK-8P63133 956 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF267Q14586 743 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF630Q2M218 657 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-207ENST00000467985 CCNYL2Q5T2Q4 361 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 DGAT2L6Q6ZPD8 337 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 FAM47EQ6ZV65 393 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 METTL4Q8N3J2 472 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 OR4K14Q8NGD5 310 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 ACMSDQ8TDX5 336 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 PHF12Q96QT6 1004 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 MRPL1Q9BYD6 325 aaKnown RBP17.64■□□□□ 0.41
COL7A1-207ENST00000467985 TXLNGYQ9BZA5 131 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 ZDHHC11Q9H8X9 412 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 IL1RL2Q9HB29 575 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 PSMC3IPQ9P2W1 217 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-207ENST00000467985 TRPS1Q9UHF7 1281 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 SLC12A4Q9UP95 1085 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 ERVK-19Q9WJR5 959 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 STK38LQ9Y2H1 464 aa17.64■□□□□ 0.41
COL7A1-207ENST00000467985 HRKO00198 91 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 GLSO94925 669 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-207ENST00000467985 TPOP07202 933 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 HSD17B3P37058 310 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 MAPK12P53778 367 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 CDH13P55290 713 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 SLC37A1P57057 533 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF791Q3KP31 576 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-207ENST00000467985 SGO1Q5FBB7 561 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 C6orf163Q5TEZ5 329 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 LETMD1Q6P1Q0 360 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 COMMD6Q7Z4G1 85 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 TICAM1Q8IUC6 712 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 OR52N2Q8NGI0 321 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 SELENOMQ8WWX9 145 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 SPACA9Q96E40 222 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-207ENST00000467985 TTTY12Q9BZ98 90 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 WWTR1Q9GZV5 400 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 CXorf21Q9HAI6 301 aa17.63■□□□□ 0.41
COL7A1-207ENST00000467985 TEX10Q9NXF1 929 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-207ENST00000467985 WASHC1A8K0Z3 465 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 FAM166BA8MTA8 275 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 PGRMC2O15173 223 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF354AO60765 605 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-207ENST00000467985 CLDN14O95500 239 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 PDYNP01213 254 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 GSTA1P08263 222 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 HSD3B1P14060 373 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 ATP5F1P24539 256 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-207ENST00000467985 HSD3B2P26439 372 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 SERPINB3P29508 390 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 CLCQ05315 142 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 IFFO1Q0D2I5 559 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 SLC29A2Q14542 456 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 RASA2Q15283 850 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 SLC22A10Q63ZE4 541 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 RPS27LQ71UM5 84 aaKnown RBP17.62■□□□□ 0.41
COL7A1-207ENST00000467985 CD163Q86VB7 1156 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 SLC22A9Q8IVM8 553 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 GALNT12Q8IXK2 581 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 TAGAPQ8N103 731 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 GAL3ST4Q96RP7 486 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 DMRTA2Q96SC8 542 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 ZNF382Q96SR6 550 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 DEFB127Q9H1M4 99 aa17.62■□□□□ 0.41
COL7A1-207ENST00000467985 TP63Q9H3D4 680 aaPredicted RBP17.62■□□□□ 0.41
COL7A1-207ENST00000467985 CNIH4Q9P003 139 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms