RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KIAA1143Q96AT1 154 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 FAM83CQ9BQN1 747 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 SLAMF7Q9NQ25 335 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 CFAP97Q9P2B7 532 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 SRRDQ9UH36 339 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 ALG5Q9Y673 324 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 MYOFQ9NZM1 2061 aa12.33□□□□□ -0.44
PDZRN3-205ENST00000466780 PLXND1Q9Y4D7 1925 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF197O14709 1029 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 APOL3O95236 402 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 POP4O95707 220 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 RAB36O95755 333 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ERP29P30040 261 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 GZMKP49863 264 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 C19orf57Q0VDD7 668 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 UNC5DQ6UXZ4 953 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 Q6ZVU0 165 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 SLC30A8Q8IWU4 369 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF740Q8NDX6 193 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 OR52P1PQ8NH57 321 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 CD99L2Q8TCZ2 262 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 RAB8BQ92930 207 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 WDR34Q96EX3 536 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 SCLYQ96I15 445 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 KCTD7Q96MP8 289 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 TM9SF2Q99805 663 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 MED18Q9BUE0 208 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 NLNQ9BYT8 704 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 THSD7BQ9C0I4 1608 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 B4GALT2O60909 372 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 FAM157BP0CG42 384 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 C1GALT1C1LP0DN25 315 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 PBLDP30039 288 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 MAP2K3P46734 347 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 PNLIPRP1P54315 467 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 PLK5Q496M5 336 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 MPP7Q5T2T1 576 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 LCN1P1Q5VSP4 162 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ACSM5Q6NUN0 579 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 COMTD1Q86VU5 262 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 PEX5LQ8IYB4 626 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 MTERF3Q96E29 417 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ZBED6CLQ96FA7 236 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ZNF582Q96NG8 517 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 SOSTQ9BQB4 213 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 POLDIP3Q9BY77 421 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 MRPL9Q9BYD2 267 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 PPP1R3EQ9H7J1 279 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 ANKRA2Q9H9E1 313 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 A4GALTQ9NPC4 353 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 B3GAT2Q9NPZ5 323 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 GIMAP4Q9NUV9 329 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 TMEM39AQ9NV64 488 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 KLHL21Q9UJP4 597 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 PLXNA2O75051 1894 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 OBSL1O75147 1896 aa12.32□□□□□ -0.44
PDZRN3-205ENST00000466780 C5orf58C9J3I9 102 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 AKR7A2O43488 359 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 HLA-DQB1P01920 261 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 P2RY14Q15391 338 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 HENMT1Q5T8I9 393 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 PLET1Q6UQ28 207 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 RFPL4BQ6ZWI9 263 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 LAPTM4BQ86VI4 370 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 CPXM2Q8N436 756 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 OR4M1Q8NGD0 313 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 MYLIPQ8WY64 445 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 SNAPC3Q92966 411 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 C1GALT1C1Q96EU7 318 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 LRR1Q96L50 414 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 EFCAB11Q9BUY7 163 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 SEMA3GQ9NS98 782 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ZSCAN32Q9NX65 697 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 MALT1Q9UDY8 824 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 LSM7Q9UK45 103 aaKnown RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 ACAD8Q9UKU7 415 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 CLCA3PQ9Y6N3 262 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 STK25O00506 426 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 PRRG1O14668 218 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 C1orf105O95561 183 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 WNT4P56705 351 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 DCDC1P59894 354 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 EFNB1P98172 346 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 FABP5Q01469 135 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TNK1Q13470 666 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 PIN1Q13526 163 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 GINS1Q14691 196 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 CRTC2Q53ET0 693 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 SMUG1Q53HV7 270 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 CEP78Q5JTW2 689 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 TIGD3Q6B0B8 471 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 CNIH2Q6PI25 160 aa12.31□□□□□ -0.44
PDZRN3-205ENST00000466780 GDPD4Q6W3E5 623 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms