RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ERI3O43414 337 aaKnown RBP15.8■□□□□ 0.12
TOP3A-202ENST00000461127 CTNSO60931 367 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 HPDP32754 393 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-202ENST00000461127 CRYZQ08257 329 aaKnown RBP15.8■□□□□ 0.12
TOP3A-202ENST00000461127 MGAT5Q09328 741 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 SERTAD2Q14140 314 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 FRG1Q14331 258 aaKnown RBP15.8■□□□□ 0.12
TOP3A-202ENST00000461127 ZNF791Q3KP31 576 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-202ENST00000461127 NXPE4Q6UWF7 544 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 DND1Q8IYX4 353 aaKnown RBP15.8■□□□□ 0.12
TOP3A-202ENST00000461127 ZNF321PQ8N8H1 164 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 FAM13CQ8NE31 585 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 TTLQ8NG68 377 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 GABPB2Q8TAK5 448 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-202ENST00000461127 CCT6BQ92526 530 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 FBXL8Q96CD0 374 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 LINGO1Q96FE5 620 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 PERPQ96FX8 193 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 CERS2Q96G23 380 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 TRIB1Q96RU8 372 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 CCL19Q99731 98 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 SH2D2AQ9NP31 389 aa15.8■□□□□ 0.12
TOP3A-202ENST00000461127 SONP18583 2426 aaKnown RBP15.79■□□□□ 0.12
TOP3A-202ENST00000461127 KIAA1549Q9HCM3 1950 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 EXOC1LA0A1B0GW35 172 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 MBD3L4A6NDZ8 208 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-202ENST00000461127 MBD3L3A6NE82 208 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-202ENST00000461127 MBD3L5A6NJ08 208 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-202ENST00000461127 LRRC3CA6NJW4 275 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 HAUS5O94927 633 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 NUDT17P0C025 328 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 TRMT10BQ6PF06 316 aaKnown RBP15.79■□□□□ 0.12
TOP3A-202ENST00000461127 PAQR3Q6TCH7 311 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 CTAGE3PQ8IX95 158 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 SLC15A4Q8N697 577 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 MBD3L2Q8NHZ7 208 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-202ENST00000461127 NUBPLQ8TB37 319 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 SPACA9Q96E40 222 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-202ENST00000461127 FAM167BQ9BTA0 163 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 DOHHQ9BU89 302 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 PRDM14Q9GZV8 571 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 ACBD3Q9H3P7 528 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 ACSS3Q9H6R3 686 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 PLAC1Q9HBJ0 212 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 FBXO5Q9UKT4 447 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 KCNE2Q9Y6J6 123 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 DOCK7Q96N67 2140 aa15.79■□□□□ 0.12
TOP3A-202ENST00000461127 MYOCOSA0A1B0GUC4 107 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 CYR61O00622 381 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 H2AFYO75367 372 aaKnown RBP15.78■□□□□ 0.12
TOP3A-202ENST00000461127 TRAPPC6AO75865 159 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 GUCA1CO95843 209 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 IFNA2P01563 188 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 TMIGD3P0DMS9 266 aaPredicted RBP15.78■□□□□ 0.12
TOP3A-202ENST00000461127 COX7A2P14406 83 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 RCAN2Q14206 197 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 ADGRD1Q6QNK2 874 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 CYS1Q717R9 158 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.78■□□□□ 0.12
TOP3A-202ENST00000461127 KLHDC8AQ8IYD2 350 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 C7orf57Q8NEG2 295 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 NTNG2Q96CW9 530 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 MS4A6EQ96DS6 147 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 ZNF597Q96LX8 424 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 SERINC2Q96SA4 455 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 FUT8Q9BYC5 575 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 AICDAQ9GZX7 198 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 COPS7BQ9H9Q2 264 aaPredicted RBP15.78■□□□□ 0.12
TOP3A-202ENST00000461127 CALHM2Q9HA72 323 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 RYDENQ9NUL5 291 aaKnown RBP15.78■□□□□ 0.12
TOP3A-202ENST00000461127 GALNT8Q9NY28 637 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 MOCS1Q9NZB8 636 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 IKBKGQ9Y6K9 419 aa15.78■□□□□ 0.12
TOP3A-202ENST00000461127 LRIT2A6NDA9 550 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 POC1B-GALNT4F8VUJ3 575 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 DYRK3O43781 588 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 CNOT4O95628 575 aaKnown RBP15.77■□□□□ 0.12
TOP3A-202ENST00000461127 C1QAP02745 245 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 SHBGP04278 402 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 GSTM2P28161 218 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 SERPINB3P29508 390 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 HNRNPH1P31943 449 aaKnown RBP15.77■□□□□ 0.12
TOP3A-202ENST00000461127 PLA2G16P53816 162 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 LIM2P55344 173 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 IL2P60568 153 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 NAB1Q13506 487 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 ACKR1Q16570 336 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 KBTBD12Q3ZCT8 623 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 HSP90AA5PQ58FG0 334 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 HMBOX1Q6NT76 420 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 TRIM40Q6P9F5 258 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 PODNL1Q6PEZ8 512 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 LRIG3Q6UXM1 1119 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 LUZP2Q86TE4 346 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 THOC6Q86W42 341 aaKnown RBP15.77■□□□□ 0.12
TOP3A-202ENST00000461127 PHC2Q8IXK0 858 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 PPM1NQ8N819 430 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 OR2W6PQ8NHA6 318 aa15.77■□□□□ 0.12
TOP3A-202ENST00000461127 MRRFQ96E11 262 aaKnown RBP15.77■□□□□ 0.12
TOP3A-202ENST00000461127 ZIM3Q96PE6 472 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms