RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 INPP5KQ9BT40 448 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 ALOXE3Q9BYJ1 711 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 GLIPR2Q9H4G4 154 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 GPN2Q9H9Y4 310 aaPredicted RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 NEUROD4Q9HD90 331 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLAMF7Q9NQ25 335 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 NECTIN3Q9NQS3 549 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 PNO1Q9NRX1 252 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 ACSS1Q9NUB1 689 aaPredicted RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 BTNL2Q9UIR0 455 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 VPS4AQ9UN37 437 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 NEUROG3Q9Y4Z2 214 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 CNOT1A5YKK6 2376 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 A0A096LPI6 279 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 IGKV3D-11A0A0A0MRZ8 115 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 RNF103-CHMP3A0A140T963 221 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 SYNDIG1LA6NDD5 238 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 DYRK3O43781 588 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ALOX12BO75342 701 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 RECKO95980 971 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ATP1B1P05026 303 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 GSNP06396 782 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 CD63P08962 238 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 RAB40ALP0C0E4 278 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC35E2P0CK97 266 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 LIPCP11150 499 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 OTX2P32243 289 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 CHI3L1P36222 383 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 MC3RP41968 323 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 CDKN2CP42773 168 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 STT3AP46977 705 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 PGDP52209 483 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 PCBP4P57723 403 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR4D2P58180 307 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 RPS18P62269 152 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 HBA1P69905 142 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 IGLV3-21P80748 117 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 MRPS35P82673 323 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 EEF1A2Q05639 463 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 CAPRIN1Q14444 709 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ELAVL1Q15717 326 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZSCAN26Q16670 478 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 GTDC1Q4AE62 458 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 PAGE3Q5JUK9 113 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 LCE2DQ5TA82 110 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 C6orf89Q6UWU4 347 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 TMEM107Q6UX40 140 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ANGPTL8Q6UXH0 198 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF517Q6ZMY9 492 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF621Q6ZSS3 439 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 LANCL3Q6ZV70 420 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 TMEM151BQ8IW70 566 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ST13P4Q8IZP2 240 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 TRIML2Q8N7C3 387 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 C7orf57Q8NEG2 295 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ADCY4Q8NFM4 1077 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR2Y1Q8NGV0 311 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 SUN3Q8TAQ9 357 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 DOK4Q8TEW6 326 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 GTF2H4Q92759 462 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 KAT2AQ92830 837 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 RIT1Q92963 219 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 NKD1Q969G9 470 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 PPWD1Q96BP3 646 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 RBM18Q96H35 190 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 MAGED4Q96JG8 741 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF681Q96N22 645 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF578Q96N58 590 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC39A3Q9BRY0 314 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 TUBB6Q9BUF5 446 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 CNPPD1Q9BV87 410 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 GPR87Q9BY21 358 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 SPRY4Q9C004 299 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 EFCAB1Q9HAE3 211 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ADAP2Q9NPF8 381 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC52A3Q9NQ40 469 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 SERHLQ9NQF3 203 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 DDX18Q9NVP1 670 aaKnown RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 GID8Q9NWU2 228 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 TAS2R9Q9NYW1 312 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 C19orf25Q9UFG5 118 aaPredicted RBP7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 ACSL6Q9UKU0 697 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 MAN2B2Q9Y2E5 1009 aa7.41□□□□□ -1.22
HMGA1P4-201ENST00000428643 LOC101059948A0A1B0GTJ6 334 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 TCRBV16S1A1N1A0A5B0 115 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 A8MUA0 341 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 B2RBV5 119 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 C17orf105B2RV13 164 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 FXYD1O00168 92 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 HNRNPCL1O60812 293 aaKnown RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 SCN2BO60939 215 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 ERN1O75460 977 aaKnown RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 KLF7O75840 302 aaPredicted RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLITRK5O94991 958 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 UNC5CO95185 931 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 UMODP07911 640 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CYC1P08574 325 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms