RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SOX3P41225 446 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 MEOX1P50221 254 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HTR6P50406 440 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HK2P52789 917 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ERVK-8P63133 956 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RNF4P78317 190 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GALNT1Q10472 559 aaPredicted RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 C4orf17Q53FE4 359 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 NDUFAF5Q5TEU4 345 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 FJX1Q86VR8 437 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 C9orf40Q8IXQ3 194 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ST13P4Q8IZP2 240 aaPredicted RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 MMP21Q8N119 569 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CNPY4Q8N129 248 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 METTL4Q8N3J2 472 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CPSF7Q8N684 471 aaKnown RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 C1orf52Q8N6N3 182 aaKnown RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 METTL6Q8TCB7 284 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ZNF721Q8TF20 911 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RIT1Q92963 219 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SENP5Q96HI0 755 aaPredicted RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 FBXL20Q96IG2 436 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 MAGED4Q96JG8 741 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ART5Q96L15 291 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GPR137Q96N19 417 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 KCNA7Q96RP8 456 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RASL10BQ96S79 203 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PELOQ9BRX2 385 aaKnown RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ACPTQ9BZG2 426 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 C12orf65Q9H3J6 166 aaKnown RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TRIM45Q9H8W5 580 aaPredicted RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TIMMDC1Q9NPL8 285 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HPF1Q9NWY4 346 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ADAM29Q9UKF5 820 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 NPIPA1Q9UND3 350 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ERVK-19Q9WJR5 959 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 STK38LQ9Y2H1 464 aa8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 YARS2Q9Y2Z4 477 aaKnown RBP8.55□□□□□ -1.04
RFX3-AS1-202ENST00000427722 DOPEY2Q9Y3R5 2298 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TRGV8A0A0C4DH27 118 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 A0A0G2JMM0 328 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 A0A1W2PPB8 328 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 A0A1W2PRS3 328 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TLDC2A0PJX2 215 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 KIR3DP1A8MWS1 328 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 G3V2L1 256 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 G3V3Y1 287 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TFECO14948 347 aaPredicted RBP8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PGRMC2O15173 223 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PLIN3O60664 434 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ULK1O75385 1050 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CRCPO75575 148 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 WISP2O76076 250 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SLU7O95391 586 aaKnown RBP8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ESRRBO95718 433 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 IGKV3-11P04433 115 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ENO1P06733 434 aaKnown RBP8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 STSP08842 583 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GP1BBP13224 206 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HSD3B1P14060 373 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CHN1P15882 459 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 KRT4P19013 534 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HSD3B2P26439 372 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PIK3R1P27986 724 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CRHR1P34998 444 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CCT5P48643 541 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ALDH9A1P49189 494 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PKNOX1P55347 436 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PER3P56645 1201 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HMGCS1Q01581 520 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RBPJQ06330 500 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 IFFO1Q0D2I5 559 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TBL3Q12788 808 aaKnown RBP8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ASPHQ12797 758 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ZNF267Q14586 743 aaPredicted RBP8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ZNF750Q32MQ0 723 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CFAP157Q5JU67 520 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HIST2H2BCQ6DN03 193 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SCIMPQ6UWF3 145 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 IL20RBQ6UXL0 311 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RNF111Q6ZNA4 994 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SH2D5Q6ZV89 423 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 MDGA2Q7Z553 956 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SIAH3Q8IW03 269 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GALNT12Q8IXK2 581 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GPALPP1Q8IXQ4 340 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PSD4Q8NDX1 1056 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 C7orf57Q8NEG2 295 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 MYRIPQ8NFW9 859 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 OR8K3Q8NH51 312 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 NUBPLQ8TB37 319 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 AGAP11Q8TF27 550 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 AENQ8WTP8 325 aaKnown RBP8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CCDC126Q96EE4 140 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GSTO2Q9H4Y5 243 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 MID1IP1Q9NPA3 183 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms