RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 MOAP1Q96BY2 351 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 TBC1D20Q96BZ9 403 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 NEURL3Q96EH8 262 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 PEX11GQ96HA9 241 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RSRC1Q96IZ7 334 aaKnown RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 OR6C1Q96RD1 312 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 SPATA9Q9BWV2 254 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RAD21L1Q9H4I0 556 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RNPEPL1Q9HAU8 725 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 SEMA3GQ9NS98 782 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 GPATCH2Q9NW75 528 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 NDOR1Q9UHB4 597 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 BCAP29Q9UHQ4 241 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 RARRES3Q9UL19 164 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 MRPS33Q9Y291 106 aaKnown RBP6.25□□□□□ -1.41
VPS41-204ENST00000413141 MAU2Q9Y6X3 613 aa6.25□□□□□ -1.41
VPS41-204ENST00000413141 OTOGLQ3ZCN5 2332 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 TCRBV5S2A0A599 114 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 AQP12BA6NM10 295 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 C4orf47A7E2U8 309 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 EFCAB7A8K855 629 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 H0Y3Z8 333 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 H3BNX3 289 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 TGFBR3LH3BV60 316 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 AGRPO00253 132 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 GDF9O60383 454 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 FKBP6O75344 327 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 TNFRSF21O75509 655 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 RFPL3O75679 317 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SCRG1O75711 98 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CDC123O75794 336 aaPredicted RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 SLITRK5O94991 958 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 KCNK5O95279 499 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 GPR75O95800 540 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 FHP07954 510 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 IFI6P09912 130 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 NUDT7P0C024 238 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 FGF5P12034 268 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 BMP2P12643 396 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ETFAP13804 333 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 PORP16435 677 aaPredicted RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 ALAS2P22557 587 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CSTF2P33240 577 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS41-204ENST00000413141 PCGF2P35227 344 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CRATP43155 626 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 OR1D4P47884 311 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CCT3P49368 545 aaKnown RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 CASP9P55211 416 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 POLE2P56282 527 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 HSD17B7P56937 341 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 RPS26P62854 115 aaKnown RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 IGLV3-21P80748 117 aaPredicted RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 MRPS35P82673 323 aaKnown RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 RHDQ02161 417 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SLC13A2Q13183 592 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ILKQ13418 452 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 TP53BP2Q13625 1128 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ADRM1Q16186 407 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 VMACQ2NL98 169 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ZNF628Q5EBL2 1059 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 MTX3Q5HYI7 312 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 GCNT6Q5T4J0 391 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ARHGAP40Q5TG30 622 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 C1orf189Q5VU69 101 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 GLYATQ6IB77 296 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 RHBDD2Q6NTF9 364 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 PWWP2BQ6NUJ5 590 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 AAGABQ6PD74 315 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 FAM111BQ6SJ93 734 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 MED25Q71SY5 747 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SZRD1Q7Z422 152 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SPATA24Q86W54 205 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 PPP1R3BQ86XI6 285 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 PROSER1Q86XN7 944 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SPPL2CQ8IUH8 684 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 TMEM126BQ8IUX1 230 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ZC3H7AQ8IWR0 971 aaKnown RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 AQP12AQ8IXF9 295 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 OR2L13Q8N349 312 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ENDOVQ8N8Q3 282 aaKnown RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 BMPERQ8N8U9 685 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 GOLM1Q8NBJ4 401 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 AGBL5Q8NDL9 886 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 OR7G2Q8NG99 324 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 OR56A1Q8NGH5 318 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 OR51Q1Q8NH59 317 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ZNF675Q8TD23 568 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 PYDC1Q8WXC3 89 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 FIG4Q92562 907 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 NCLNQ969V3 563 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ANKRD9Q96BM1 317 aaPredicted RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 ELP4Q96EB1 424 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SLC35G5Q96KT7 338 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 LRGUKQ96M69 825 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 NSMCE2Q96MF7 247 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 OR1F2PQ96R84 312 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CDC6Q99741 560 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 IRF2BPLQ9H1B7 796 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SERHL2Q9H4I8 314 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms