RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC39A12Q504Y0 691 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 RFTN2Q52LD8 501 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC25A30Q5SVS4 291 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 AFMIDQ63HM1 303 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC27A4Q6P1M0 643 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 LILRA6Q6PI73 481 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 PIM3Q86V86 326 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 MIB1Q86YT6 1006 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 CMIPQ8IY22 773 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 LIX1Q8N485 282 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 NETO2Q8NC67 525 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 BVESQ8NE79 360 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 METTL6Q8TCB7 284 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC22A8Q8TCC7 542 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 TADA1Q96BN2 335 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 LCORQ96JN0 433 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ARL5BQ96KC2 179 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 COQ10AQ96MF6 247 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 KCNC2Q96PR1 638 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 C7orf50Q9BRJ6 194 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 H2AFJQ9BTM1 129 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 LRFN3Q9BTN0 628 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ACTR6Q9GZN1 396 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 OR51J1Q9H342 316 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SFXN1Q9H9B4 322 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 BIN3Q9NQY0 253 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 TMLHEQ9NVH6 421 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 DZANK1Q9NVP4 752 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 GALPQ9UBC7 116 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 GSTK1Q9Y2Q3 226 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 MRPS7Q9Y2R9 242 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 POLR3HQ9Y535 204 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 NME7Q9Y5B8 376 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SHROOM3Q8TF72 1996 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 CACNA1HO95180 2353 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 TMEM82A0PJX8 343 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 GNB5O14775 395 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 CSO75390 466 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ZNF682O95780 498 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 OTCP00480 354 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 FHP07954 510 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SRCP12931 536 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 TYRP14679 529 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 CD46P15529 392 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 DNASE1P24855 282 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 APEX1P27695 318 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 KCNJ5P48544 419 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ZNF81P51508 661 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 HNRNPA0Q13151 305 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 DMC1Q14565 340 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 MICBQ29980 383 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SPANXN4Q5MJ08 99 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 CNIH2Q6PI25 160 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 IL27RAQ6UWB1 636 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 SEZ6L2Q6UXD5 910 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ARHGAP12Q8IWW6 846 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 UBE2J2Q8N2K1 259 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ATPAF2Q8N5M1 289 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 FAM46DQ8NEK8 389 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 OR10G2Q8NGC3 310 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 TEX47Q8TBZ9 253 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ZNF707Q96C28 371 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 CHFRQ96EP1 664 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ASIC4Q96FT7 647 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 OTUB1Q96FW1 271 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 IMP4Q96G21 291 aaKnown RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 HSH2DQ96JZ2 352 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 BBS4Q96RK4 519 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 FEVQ99581 238 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 DUSP16Q9BY84 665 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 RSPH9Q9H1X1 276 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 CRISPLD1Q9H336 500 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 DLL4Q9NR61 685 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 THSD1Q9NS62 852 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 ING1Q9UK53 422 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
NIF3L1-204ENST00000409357 TRAV19A0A0A6YYK7 116 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 A0A1B0GW55 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 H3BM21 787 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 H7C2Y5 167 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 PSIP1O75475 530 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 KCNK5O95279 499 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 TP53P04637 393 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 ASGR2P07307 311 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 DUX4L2P0CJ85 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 DUX4L3P0CJ86 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 DUX4L4P0CJ87 422 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 DUX4L5P0CJ88 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 DUX4L6P0CJ89 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 DUX4L7P0CJ90 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 PRPH2P23942 346 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 INPP1P49441 399 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 AGFG1P52594 562 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 KCNJ10P78508 379 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 SP140Q13342 867 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 GPR176Q14439 515 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 LAPTM4AQ15012 233 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 ZBTB6Q15916 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 OCLNQ16625 522 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms