RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TMEM151BQ8IW70 566 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 MFSD9Q8NBP5 474 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 ALPK1Q96QP1 1244 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 OR51V1Q9H2C8 321 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 IL1RAPQ9NPH3 570 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 C1GALT1Q9NS00 363 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TEX10Q9NXF1 929 aaPredicted RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 DHCR7Q9UBM7 475 aaKnown RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 PISDQ9UG56 409 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 SLC17A4Q9Y2C5 497 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 PRAMEF33A0A0G2JMD5 474 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 PNMA8CA0A1B0GUJ8 204 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 OR5K3A6NET4 321 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 CHST10O43529 356 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 PFDN1O60925 122 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 SBK3P0C264 359 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 SLC6A12P48065 614 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 MS4A2Q01362 244 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 SERTAD2Q14140 314 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 ZNF423Q2M1K9 1284 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 LRIT3Q3SXY7 679 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TRIM46Q7Z4K8 759 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 JAZF1Q86VZ6 243 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 PPP1R3BQ86XI6 285 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 GHDCQ8N2G8 530 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 VWA5B2Q8N398 1253 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 ZCCHC7Q8N3Z6 543 aaKnown RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 AGBL5Q8NDL9 886 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TMEM125Q96AQ2 219 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TCTN2Q96GX1 697 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TCEAL2Q9H3H9 227 aaPredicted RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 CLMPQ9H6B4 373 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 CCNB1IP1Q9NPC3 277 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 PADI2Q9Y2J8 665 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 LCTP09848 1927 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 SCN5AQ14524 2016 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 SPTY2D1-AS1A0A0U1RR47 76 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 LDOC1O95751 146 aaPredicted RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 HBQ1P09105 142 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 RBMS1P29558 406 aaKnown RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 BCL6P41182 706 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TMED10P49755 219 aaKnown RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 EMP2P54851 167 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 NR1H2P55055 460 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 MAT1AQ00266 395 aaKnown RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 PCDH1Q08174 1060 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 MERTKQ12866 999 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 RAPSNQ13702 412 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 CCNIQ14094 377 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TMEM184AQ6ZMB5 413 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 ASRGL1Q7L266 308 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 MCEMP1Q8IX19 187 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 DTWD1Q8N5C7 304 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 AQP11Q8NBQ7 271 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 TP53I13Q8NBR0 393 aaPredicted RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 OR4C6Q8NH72 309 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 GTF2H4Q92759 462 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 IL4I1Q96RQ9 567 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 ELF4Q99607 663 aaPredicted RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 DOHHQ9BU89 302 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.62□□□□□ -1.03
LIG4-202ENST00000405925 BTNL2Q9UIR0 455 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 ZNF451Q9Y4E5 1061 aa8.62□□□□□ -1.03
LIG4-202ENST00000405925 IGLV3-16A0A075B6K0 115 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 TLCD2A6NGC4 264 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 RNASET2O00584 256 aaKnown RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 STX11O75558 287 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 SOX14O95416 240 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 AIFM1O95831 613 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 BCL10O95999 233 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 BMP8BP34820 402 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 SOX6P35712 828 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 RPL5P46777 297 aaKnown RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 CLCN2P51788 898 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 HBA1P69905 142 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 RPP38P78345 283 aaKnown RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 RGNQ15493 299 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ALKBH2Q6NS38 261 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 NUP54Q7Z3B4 507 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 OR10H5Q8NGA6 315 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 OR5D16Q8NGK9 328 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 OR52P1PQ8NH57 321 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 SUN3Q8TAQ9 357 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 TBC1D20Q96BZ9 403 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 LINC00615Q96LM1 132 aaPredicted RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 SMURF2Q9HAU4 748 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 PAPOLBQ9NRJ5 636 aaKnown RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 CUTCQ9NTM9 273 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.61□□□□□ -1.037e-9■■■■■ 38.5
LIG4-202ENST00000405925 SLC6A14Q9UN76 642 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ZSWIM8A7E2V4 1837 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 MYO10Q9HD67 2058 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 ARNTLO00327 626 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 FADS2O95864 444 aaKnown RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 WDR53Q7Z5U6 358 aaPredicted RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 WDR36Q8NI36 951 aaKnown RBP8.61□□□□□ -1.03
LIG4-202ENST00000405925 CEP76Q8TAP6 659 aa8.61□□□□□ -1.03
LIG4-202ENST00000405925 KLHL6Q8WZ60 621 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms