RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SQLEQ14534 574 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 MEP1AQ16819 746 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 SYT16Q17RD7 645 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 IRAK1BP1Q5VVH5 260 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 BNC2Q6ZN30 1099 aaPredicted RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 MAVSQ7Z434 540 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 GALNT16Q8N428 558 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 ZNF615Q8N8J6 731 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 ANKS4BQ8N8V4 417 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 GOLM1Q8NBJ4 401 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 TUBGCP3Q96CW5 907 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 CCDC115Q96NT0 180 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 BTBD9Q96Q07 612 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 MACROD1Q9BQ69 325 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 PNPOQ9NVS9 261 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 HEY2Q9UBP5 337 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 COPS7AQ9UBW8 275 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 C19orf53Q9UNZ5 99 aaPredicted RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 KNTC1P50748 2209 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 DCHS1Q96JQ0 3298 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 CAPN14A8MX76 684 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 RTCAO00442 366 aaKnown RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 ASNA1O43681 348 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 NGFRP08138 427 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 DRD5P21918 477 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 MLF1P58340 268 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 MRPS22P82650 360 aaKnown RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 BHLHB9Q6PI77 547 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 LAPTM4BQ86VI4 370 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 TMEM151BQ8IW70 566 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 GALNT12Q8IXK2 581 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 FNDC5Q8NAU1 212 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 POGLUT1Q8NBL1 392 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 SUN3Q8TAQ9 357 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 PSMF1Q92530 271 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 EVA1AQ9H8M9 152 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 ACSS2Q9NR19 701 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 POLE3Q9NRF9 147 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 THUMPD1Q9NXG2 353 aaKnown RBP7.02□□□□□ -1.29
USP16-204ENST00000399976 MAT2BQ9NZL9 334 aa7.02□□□□□ -1.29
USP16-204ENST00000399976 FAM234BA2RU67 622 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 WDR91A4D1P6 747 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 ANKRD33BA6NCL7 494 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 TMEM233B4DJY2 109 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 FCHO1O14526 889 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 NKX2-8O15522 239 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 PDPK1O15530 556 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 ABCB7O75027 752 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 ZFAND5O76080 213 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 AGR2O95994 175 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 TRPC1P48995 793 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 IDH3AP50213 366 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 POLE2P56282 527 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 SLC37A1P57057 533 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 CXADRP78310 365 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 RPP38P78345 283 aaKnown RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 C2orf80Q0P641 193 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 PIGGQ5H8A4 983 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 TBCELQ5QJ74 424 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 IL23RQ5VWK5 629 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 C18orf63Q68DL7 685 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 ISLR2Q6UXK2 745 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 LIX1Q8N485 282 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 RNF175Q8N4F7 328 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 SLC2A12Q8TD20 617 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 PPCDCQ96CD2 204 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 MTFMTQ96DP5 389 aaKnown RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 CNRIP1Q96F85 164 aaPredicted RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 CHMP6Q96FZ7 201 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 RBM18Q96H35 190 aaKnown RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 AMDHD1Q96NU7 426 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 STACQ99469 402 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 PAIP2Q9BPZ3 127 aaKnown RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 ING2Q9H160 280 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 SH2D2AQ9NP31 389 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 TCF7L2Q9NQB0 619 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 MIEF1Q9NQG6 463 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 UTS2RQ9UKP6 389 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 FBXW2Q9UKT8 454 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 YARS2Q9Y2Z4 477 aaKnown RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 MRPS18BQ9Y676 258 aaKnown RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 FRG2CA6NGY1 282 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 BBIP1A8MTZ0 92 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 POLR3GO15318 223 aaPredicted RBP7.01□□□□□ -1.29
USP16-204ENST00000399976 AK1P00568 194 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 ITPKBP27987 946 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 SERPINB3P29508 390 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 PRDX6P30041 224 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 OTX2P32243 289 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 XKP51811 444 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 RCAN2Q14206 197 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 AGAP7PQ5VUJ5 663 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 METTL25Q8N6Q8 603 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 HORMAD2Q8N7B1 307 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 VPS37AQ8NEZ2 397 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 OR56A1Q8NGH5 318 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 MGARPQ8TDB4 240 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 RIT1Q92963 219 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 KLHL29Q96CT2 875 aa7.01□□□□□ -1.29
USP16-204ENST00000399976 SCMH1Q96GD3 660 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms